Difference between revisions of "RXN-1321"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16654 RXN-16654] == * direction: ** REVERSIBLE * common name: ** aldehyde dehydrogenase, (NAD)...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1321 RXN-1321] == * direction: ** LEFT-TO-RIGHT * common name: ** Lipoxygenase * ec number: **...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16654 RXN-16654] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1321 RXN-1321] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** aldehyde dehydrogenase, (NAD) activity
+
** Lipoxygenase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.2.1.3 EC-1.2.1.3]
+
** [http://enzyme.expasy.org/EC/1.13.11.12 EC-1.13.11.12]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[WATER]][c] '''+''' 1 [[CPD-7880]][c] '''+''' 1 [[NAD]][c] '''<=>''' 2 [[PROTON]][c] '''+''' 1 [[DODECANOATE]][c] '''+''' 1 [[NADH]][c]
+
** 1 [[LINOLENIC_ACID]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[CPD-725]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H2O[c] '''+''' 1 dodecanal[c] '''+''' 1 NAD+[c] '''<=>''' 2 H+[c] '''+''' 1 laurate[c] '''+''' 1 NADH[c]
+
** 1 &alpha;-linolenate[c] '''+''' 1 oxygen[c] '''=>''' 1 13(S)-HPOTE[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[CHC_T00008341001_1]]
+
* Gene: [[CHC_T00008739001]]
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
** Source: [[annotation-original_genome]]
−
* [[CHC_T00008341001]]
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*** Assignment: AUTOMATED-NAME-MATCH
−
** ORIGINAL_GENOME
+
* Gene: [[CHC_T00008739001_1]]
−
***AUTOMATED-NAME-MATCH
+
** Source: [[orthology-ectocarpus_siliculosus]]
 +
** Source: [[orthology-arabidopsis_thaliana]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-5410]], traumatin and (Z)-3-hexen-1-yl acetate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5410 PWY-5410]
 +
** '''3''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-735]], jasmonic acid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-735 PWY-735]
 +
** '''13''' reactions found over '''19''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-arabidopsis_thaliana]]
−
*** [[galdieria.sulphuraria]]
+
*** Tool: [[pantograph]]
−
* [[annotation]]:
+
** Source: [[orthology-ectocarpus_siliculosus]]
−
** [[pathwaytools]]:
+
*** Tool: [[pantograph]]
−
*** [[original_genome]]
+
* Category: [[annotation]]
 +
** Source: [[annotation-original_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=REVERSIBLE}}
+
* RHEA:
−
{{#set: common name=aldehyde dehydrogenase, (NAD) activity}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=34495 34495]
−
{{#set: ec number=EC-1.2.1.3}}
+
* LIGAND-RXN:
−
{{#set: gene associated=CHC_T00008341001_1|CHC_T00008341001}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R07869 R07869]
−
{{#set: in pathway=}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: common name=Lipoxygenase}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: ec number=EC-1.13.11.12}}
−
{{#set: reconstruction source=galdieria.sulphuraria}}
+
{{#set: gene associated=CHC_T00008739001|CHC_T00008739001_1}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: in pathway=PWY-5410|PWY-735}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction source=original_genome}}
+
{{#set: reconstruction source=annotation-original_genome|orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 15:30, 23 May 2018

Reaction RXN-1321

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Lipoxygenase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5410, traumatin and (Z)-3-hexen-1-yl acetate biosynthesis: PWY-5410
    • 3 reactions found over 9 reactions in the full pathway
  • PWY-735, jasmonic acid biosynthesis: PWY-735
    • 13 reactions found over 19 reactions in the full pathway

Reconstruction information

External links





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