Difference between revisions of "PWY-6344"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=UNSPECIFIC-MONOOXYGENASE-RXN UNSPECIFIC-MONOOXYGENASE-RXN] == * direction: ** LEFT-TO-RIGHT * ec nu...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6344 PWY-6344] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-200918 TAX-...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=UNSPECIFIC-MONOOXYGENASE-RXN UNSPECIFIC-MONOOXYGENASE-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6344 PWY-6344] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-200918 TAX-200918]
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* ec number:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-201174 TAX-201174]
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** [http://enzyme.expasy.org/EC/1.14.14.1 EC-1.14.14.1]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1239 TAX-1239]
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* common name:
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** L-ornithine degradation II (Stickland reaction)
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''3''' reactions found over '''9''' reactions in the full pathway
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** 1 [[Red-NADPH-Hemoprotein-Reductases]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[RH-Group]][c] '''=>''' 1 [[Alcohols]][c] '''+''' 1 [[Ox-NADPH-Hemoprotein-Reductases]][c] '''+''' 1 [[WATER]][c]
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* [[ORNITHINE-GLU-AMINOTRANSFERASE-RXN]]
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* With common name(s):
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** 1 associated gene(s):
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** 1 a reduced [NADPH-hemoprotein reductase][c] '''+''' 1 oxygen[c] '''+''' 1 an organic molecule[c] '''=>''' 1 an alcohol[c] '''+''' 1 an oxidized [NADPH-hemoprotein reductase][c] '''+''' 1 H2O[c]
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*** [[CHC_T00002893001_1]]
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** 2 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[orthology-ectocarpus_siliculosus]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[orthology-galdieria.sulphuraria]]
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* [[CHC_T00009131001_1]]
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* [[PYRROLINECARBREDUCT-RXN]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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** 1 associated gene(s):
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* [[CHC_T00008799001_1]]
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*** [[CHC_T00001376001_1]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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** 2 reconstruction source(s) associated:
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* [[CHC_T00009062001_1]]
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*** [[orthology-ectocarpus_siliculosus]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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*** [[orthology-galdieria.sulphuraria]]
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* [[CHC_T00009144001_1]]
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* [[SPONTPRO-RXN]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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** 0 associated gene:
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* [[CHC_T00008302001_1]]
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** 1 reconstruction source(s) associated:
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** [[pantograph]]-[[galdieria.sulphuraria]]
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*** [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
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* [[CHC_T00010004001_1]]
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== Reaction(s) not found ==
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** [[pantograph]]-[[galdieria.sulphuraria]]
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* [http://metacyc.org/META/NEW-IMAGE?object=24-DIAMINOPENTANOATE-DEHYDROGENASE-RXN 24-DIAMINOPENTANOATE-DEHYDROGENASE-RXN]
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* [[CHC_T00009499001_1]]
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* [http://metacyc.org/META/NEW-IMAGE?object=AKPTHIOL-RXN AKPTHIOL-RXN]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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* [http://metacyc.org/META/NEW-IMAGE?object=ORNITHINE-RACEMASE-RXN ORNITHINE-RACEMASE-RXN]
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* [[CHC_T00008672001_1]]
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* [http://metacyc.org/META/NEW-IMAGE?object=ORNMUTST-RXN ORNMUTST-RXN]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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* [http://metacyc.org/META/NEW-IMAGE?object=PRDABST-RXN PRDABST-RXN]
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* [[CHC_T00008616001_1]]
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* [http://metacyc.org/META/NEW-IMAGE?object=PROLINE-RACEMASE-RXN PROLINE-RACEMASE-RXN]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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* [[CHC_T00008663001_1]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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* [[CHC_T00010245001_1]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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* [[CHC_T00008813001_1]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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== Pathways  ==
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[galdieria.sulphuraria]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-200918}}
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** [http://www.genome.jp/dbget-bin/www_bget?R04122 R04122]
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{{#set: taxonomic range=TAX-201174}}
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* UNIPROT:
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{{#set: taxonomic range=TAX-1239}}
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** [http://www.uniprot.org/uniprot/P04800 P04800]
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{{#set: common name=L-ornithine degradation II (Stickland reaction)}}
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** [http://www.uniprot.org/uniprot/Q06884 Q06884]
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{{#set: reaction found=3}}
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** [http://www.uniprot.org/uniprot/P10632 P10632]
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{{#set: total reaction=9}}
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** [http://www.uniprot.org/uniprot/P14779 P14779]
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{{#set: completion rate=33.0}}
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** [http://www.uniprot.org/uniprot/O08336 O08336]
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** [http://www.uniprot.org/uniprot/Q7M0C2 Q7M0C2]
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** [http://www.uniprot.org/uniprot/P00185 P00185]
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** [http://www.uniprot.org/uniprot/P00176 P00176]
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** [http://www.uniprot.org/uniprot/P49602 P49602]
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** [http://www.uniprot.org/uniprot/P43083 P43083]
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** [http://www.uniprot.org/uniprot/Q12573 Q12573]
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** [http://www.uniprot.org/uniprot/O04892 O04892]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: ec number=EC-1.14.14.1}}
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{{#set: gene associated=CHC_T00009131001_1|CHC_T00008799001_1|CHC_T00009062001_1|CHC_T00009144001_1|CHC_T00008302001_1|CHC_T00010004001_1|CHC_T00009499001_1|CHC_T00008672001_1|CHC_T00008616001_1|CHC_T00008663001_1|CHC_T00010245001_1|CHC_T00008813001_1}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=galdieria.sulphuraria}}
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Revision as of 16:39, 23 May 2018

Pathway PWY-6344

Reaction(s) found

3 reactions found over 9 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=PWY-6344&oldid=14925"