Difference between revisions of "PWY-6344"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=UNSPECIFIC-MONOOXYGENASE-RXN UNSPECIFIC-MONOOXYGENASE-RXN] == * direction: ** LEFT-TO-RIGHT * ec nu...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6344 PWY-6344] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-200918 TAX-...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Pathway]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=UNSPECIFIC-MONOOXYGENASE-RXN UNSPECIFIC-MONOOXYGENASE-RXN] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6344 PWY-6344] ==
−
* direction:
+
* taxonomic range:
−
** LEFT-TO-RIGHT
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-200918 TAX-200918]
−
* ec number:
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-201174 TAX-201174]
−
** [http://enzyme.expasy.org/EC/1.14.14.1 EC-1.14.14.1]
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1239 TAX-1239]
 +
* common name:
 +
** L-ornithine degradation II (Stickland reaction)
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reaction(s) found ==
−
* With identifiers:
+
'''3''' reactions found over '''9''' reactions in the full pathway
−
** 1 [[Red-NADPH-Hemoprotein-Reductases]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[RH-Group]][c] '''=>''' 1 [[Alcohols]][c] '''+''' 1 [[Ox-NADPH-Hemoprotein-Reductases]][c] '''+''' 1 [[WATER]][c]
+
* [[ORNITHINE-GLU-AMINOTRANSFERASE-RXN]]
−
* With common name(s):
+
** 1 associated gene(s):
−
** 1 a reduced [NADPH-hemoprotein reductase][c] '''+''' 1 oxygen[c] '''+''' 1 an organic molecule[c] '''=>''' 1 an alcohol[c] '''+''' 1 an oxidized [NADPH-hemoprotein reductase][c] '''+''' 1 H2O[c]
+
*** [[CHC_T00002893001_1]]
−
 
+
** 2 reconstruction source(s) associated:
−
== Genes associated with this reaction  ==
+
*** [[orthology-ectocarpus_siliculosus]]
−
Genes have been associated with this reaction based on different elements listed below.
+
*** [[orthology-galdieria.sulphuraria]]
−
* [[CHC_T00009131001_1]]
+
* [[PYRROLINECARBREDUCT-RXN]]
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
** 1 associated gene(s):
−
* [[CHC_T00008799001_1]]
+
*** [[CHC_T00001376001_1]]
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
** 2 reconstruction source(s) associated:
−
* [[CHC_T00009062001_1]]
+
*** [[orthology-ectocarpus_siliculosus]]
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
*** [[orthology-galdieria.sulphuraria]]
−
* [[CHC_T00009144001_1]]
+
* [[SPONTPRO-RXN]]
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
** 0 associated gene:
−
* [[CHC_T00008302001_1]]
+
** 1 reconstruction source(s) associated:
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
*** [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
−
* [[CHC_T00010004001_1]]
+
== Reaction(s) not found ==
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
* [http://metacyc.org/META/NEW-IMAGE?object=24-DIAMINOPENTANOATE-DEHYDROGENASE-RXN 24-DIAMINOPENTANOATE-DEHYDROGENASE-RXN]
−
* [[CHC_T00009499001_1]]
+
* [http://metacyc.org/META/NEW-IMAGE?object=AKPTHIOL-RXN AKPTHIOL-RXN]
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
* [http://metacyc.org/META/NEW-IMAGE?object=ORNITHINE-RACEMASE-RXN ORNITHINE-RACEMASE-RXN]
−
* [[CHC_T00008672001_1]]
+
* [http://metacyc.org/META/NEW-IMAGE?object=ORNMUTST-RXN ORNMUTST-RXN]
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
* [http://metacyc.org/META/NEW-IMAGE?object=PRDABST-RXN PRDABST-RXN]
−
* [[CHC_T00008616001_1]]
+
* [http://metacyc.org/META/NEW-IMAGE?object=PROLINE-RACEMASE-RXN PROLINE-RACEMASE-RXN]
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
−
* [[CHC_T00008663001_1]]
+
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
−
* [[CHC_T00010245001_1]]
+
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
−
* [[CHC_T00008813001_1]]
+
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
−
== Pathways  ==
+
−
== Reconstruction information  ==
+
−
* [[orthology]]:
+
−
** [[pantograph]]:
+
−
*** [[galdieria.sulphuraria]]
+
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
+
{{#set: taxonomic range=TAX-200918}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R04122 R04122]
+
{{#set: taxonomic range=TAX-201174}}
−
* UNIPROT:
+
{{#set: taxonomic range=TAX-1239}}
−
** [http://www.uniprot.org/uniprot/P04800 P04800]
+
{{#set: common name=L-ornithine degradation II (Stickland reaction)}}
−
** [http://www.uniprot.org/uniprot/Q06884 Q06884]
+
{{#set: reaction found=3}}
−
** [http://www.uniprot.org/uniprot/P10632 P10632]
+
{{#set: total reaction=9}}
−
** [http://www.uniprot.org/uniprot/P14779 P14779]
+
{{#set: completion rate=33.0}}
−
** [http://www.uniprot.org/uniprot/O08336 O08336]
+
−
** [http://www.uniprot.org/uniprot/Q7M0C2 Q7M0C2]
+
−
** [http://www.uniprot.org/uniprot/P00185 P00185]
+
−
** [http://www.uniprot.org/uniprot/P00176 P00176]
+
−
** [http://www.uniprot.org/uniprot/P49602 P49602]
+
−
** [http://www.uniprot.org/uniprot/P43083 P43083]
+
−
** [http://www.uniprot.org/uniprot/Q12573 Q12573]
+
−
** [http://www.uniprot.org/uniprot/O04892 O04892]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: ec number=EC-1.14.14.1}}
+
−
{{#set: gene associated=CHC_T00009131001_1|CHC_T00008799001_1|CHC_T00009062001_1|CHC_T00009144001_1|CHC_T00008302001_1|CHC_T00010004001_1|CHC_T00009499001_1|CHC_T00008672001_1|CHC_T00008616001_1|CHC_T00008663001_1|CHC_T00010245001_1|CHC_T00008813001_1}}
+
−
{{#set: in pathway=}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=galdieria.sulphuraria}}
+

Revision as of 15:39, 23 May 2018

Pathway PWY-6344

Reaction(s) found

3 reactions found over 9 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=PWY-6344&oldid=14925"