Difference between revisions of "HOMOSER-METSYN-PWY"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9658 RXN-9658] == * direction: ** LEFT-TO-RIGHT * common name: ** trans hex-2-enoyl-[acp]-reduc...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=HOMOSER-METSYN-PWY HOMOSER-METSYN-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?ob...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9658 RXN-9658] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=HOMOSER-METSYN-PWY HOMOSER-METSYN-PWY] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
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** trans hex-2-enoyl-[acp]-reductase
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** L-methionine biosynthesis I
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* ec number:
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** [http://enzyme.expasy.org/EC/1.3.1.9 EC-1.3.1.9]
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* Synonym(s):
 
* Synonym(s):
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** L-methionine biosynthesis from L-homoserine
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** L-methionine biosynthesis by transsulfuration
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''5''' reactions found over '''5''' reactions in the full pathway
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** 1 [[NADH]][c] '''+''' 1 [[Hex-2-enoyl-ACPs]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[Hexanoyl-ACPs]][c] '''+''' 1 [[NAD]][c]
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* [[HOMOCYSMET-RXN]]
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* With common name(s):
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** 3 associated gene(s):
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** 1 NADH[c] '''+''' 1 a trans hex-2-enoyl-[acp][c] '''+''' 1 H+[c] '''=>''' 1 a hexanoyl-[acyl-carrier-protein][c] '''+''' 1 NAD+[c]
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*** [[CHC_T00009326001]]
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*** [[CHC_T00005524001_1]]
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== Genes associated with this reaction  ==
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*** [[CHC_T00009326001_1]]
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Genes have been associated with this reaction based on different elements listed below.
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** 4 reconstruction source(s) associated:
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* [[CHC_T00009325001_1]]
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*** [[annotation-original_genome]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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*** [[orthology-arabidopsis_thaliana]]
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== Pathways  ==
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*** [[orthology-ectocarpus_siliculosus]]
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* [[PWY-5971]], palmitate biosynthesis II (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5971 PWY-5971]
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*** [[orthology-galdieria.sulphuraria]]
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** '''31''' reactions found over '''31''' reactions in the full pathway
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* [[HOMOCYSMETB12-RXN]]
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== Reconstruction information  ==
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** 1 associated gene(s):
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* [[orthology]]:
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*** [[CHC_T00005524001_1]]
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** [[pantograph]]:
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** 1 reconstruction source(s) associated:
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*** [[galdieria.sulphuraria]]
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*** [[orthology-ectocarpus_siliculosus]]
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* [[HOMSUCTRAN-RXN]]
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** 0 associated gene:
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** 1 reconstruction source(s) associated:
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*** [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
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* [[O-SUCCHOMOSERLYASE-RXN]]
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** 1 associated gene(s):
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*** [[CHC_T00008547001_1]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-arabidopsis_thaliana]]
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*** [[orthology-ectocarpus_siliculosus]]
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*** [[orthology-galdieria.sulphuraria]]
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* [[RXN-15131]]
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** 1 associated gene(s):
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*** [[CHC_T00008829001_1]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-galdieria.sulphuraria]]
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== Reaction(s) not found ==
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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* ECOCYC:
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{{#set: common name=trans hex-2-enoyl-[acp]-reductase}}
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=HOMOSER-METSYN-PWY HOMOSER-METSYN-PWY]
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{{#set: ec number=EC-1.3.1.9}}
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{{#set: taxonomic range=TAX-2}}
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{{#set: gene associated=CHC_T00009325001_1}}
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{{#set: common name=L-methionine biosynthesis I}}
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{{#set: in pathway=PWY-5971}}
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{{#set: common name=L-methionine biosynthesis from L-homoserine|L-methionine biosynthesis by transsulfuration}}
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{{#set: reconstruction category=orthology}}
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{{#set: reaction found=5}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: total reaction=5}}
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{{#set: reconstruction source=galdieria.sulphuraria}}
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{{#set: completion rate=100.0}}

Revision as of 15:39, 23 May 2018

Pathway HOMOSER-METSYN-PWY

  • taxonomic range:
  • common name:
    • L-methionine biosynthesis I
  • Synonym(s):
    • L-methionine biosynthesis from L-homoserine
    • L-methionine biosynthesis by transsulfuration

Reaction(s) found

5 reactions found over 5 reactions in the full pathway

Reaction(s) not found

External links




Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=HOMOSER-METSYN-PWY&oldid=14940"