Difference between revisions of "GERANYLGERANYL-PP"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CATAL-RXN CATAL-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=GERANYLGERANYL-PP GERANYLGERANYL-PP] == * smiles: ** CC(C)=CCCC(C)=CCCC(C)=CCCC(C)=CCOP(=O)([O-...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CATAL-RXN CATAL-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=GERANYLGERANYL-PP GERANYLGERANYL-PP] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** CC(C)=CCCC(C)=CCCC(C)=CCCC(C)=CCOP(=O)([O-])OP(=O)([O-])[O-]
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* ec number:
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* inchi key:
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** [http://enzyme.expasy.org/EC/1.11.1.6 EC-1.11.1.6]
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** InChIKey=OINNEUNVOZHBOX-QIRCYJPOSA-K
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** [http://enzyme.expasy.org/EC/1.11.1.21 EC-1.11.1.21]
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* common name:
 +
** geranylgeranyl diphosphate
 +
* molecular weight:
 +
** 447.424   
 
* Synonym(s):
 
* Synonym(s):
 +
** all-trans-geranyl-geranyl-pp
 +
** geranylgeranyl-PP
 +
** GGPP
 +
** geranylgeranyl diphosphate
 +
** (2E,6E,10E)-geranylgeranyl diphosphate
 +
** ω,E,E,E-geranylgeranyl diphosphate
 +
** (2E,6E,10E)-3,7,11,15-tetramethylhexadeca-2,6,10,14-tetraen-1-yl diphosphate
 +
** all-trans-geranylgeranyl diphosphate
 +
** 2-trans,6-trans,10-trans-geranylgeranyl diphosphate
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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* [[RXN-10441]]
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** 2 [[HYDROGEN-PEROXIDE]][c] '''=>''' 2 [[WATER]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c]
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* [[RXN-7663]]
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* With common name(s):
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* [[RXN-10625]]
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** 2 hydrogen peroxide[c] '''=>''' 2 H2O[c] '''+''' 1 oxygen[c]
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* [[2.5.1.41-RXN]]
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* [[RXN-11486]]
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== Genes associated with this reaction  ==
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== Reaction(s) known to produce the compound ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[FARNESYLTRANSTRANSFERASE-RXN]]
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* [[CHC_T00007915001_1]]
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== Reaction(s) of unknown directionality ==
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** [[pantograph]]-[[galdieria.sulphuraria]]
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* [[RXN-7673]]
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** [[pantograph]]-[[a.taliana]]
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* [[RXN-7658]]
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== Pathways  ==
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* [[RXN-3701]]
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* [[PWY-5506]], methanol oxidation to formaldehyde IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5506 PWY-5506]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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* [[DETOX1-PWY-1]], reactive oxygen species degradation: [http://metacyc.org/META/NEW-IMAGE?object=DETOX1-PWY-1 DETOX1-PWY-1]
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** '''5''' reactions found over '''6''' reactions in the full pathway
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* [[DETOX1-PWY]], superoxide radicals degradation: [http://metacyc.org/META/NEW-IMAGE?object=DETOX1-PWY DETOX1-PWY]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[galdieria.sulphuraria]]
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*** [[a.taliana]]
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== External links  ==
 
== External links  ==
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* RHEA:
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* DRUGBANK : DB07841
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20309 20309]
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* PUBCHEM:
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* LIGAND-RXN:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=5497105 5497105]
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** [http://www.genome.jp/dbget-bin/www_bget?R00009 R00009]
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* HMDB : HMDB04486
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* UNIPROT:
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* LIGAND-CPD:
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** [http://www.uniprot.org/uniprot/P11934 P11934]
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** [http://www.genome.jp/dbget-bin/www_bget?C00353 C00353]
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** [http://www.uniprot.org/uniprot/P24270 P24270]
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* CHEMSPIDER:
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** [http://www.uniprot.org/uniprot/P21179 P21179]
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** [http://www.chemspider.com/Chemical-Structure.4593687.html 4593687]
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** [http://www.uniprot.org/uniprot/P24168 P24168]
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* CHEBI:
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** [http://www.uniprot.org/uniprot/Q7M184 Q7M184]
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=58756 58756]
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** [http://www.uniprot.org/uniprot/P0A327 P0A327]
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* METABOLIGHTS : MTBLC58756
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** [http://www.uniprot.org/uniprot/P45737 P45737]
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{{#set: smiles=CC(C)=CCCC(C)=CCCC(C)=CCCC(C)=CCOP(=O)([O-])OP(=O)([O-])[O-]}}
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** [http://www.uniprot.org/uniprot/P42321 P42321]
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{{#set: inchi key=InChIKey=OINNEUNVOZHBOX-QIRCYJPOSA-K}}
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** [http://www.uniprot.org/uniprot/O28050 O28050]
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{{#set: common name=geranylgeranyl diphosphate}}
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** [http://www.uniprot.org/uniprot/Q59337 Q59337]
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{{#set: molecular weight=447.424    }}
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** [http://www.uniprot.org/uniprot/P77872 P77872]
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{{#set: common name=all-trans-geranyl-geranyl-pp|geranylgeranyl-PP|GGPP|geranylgeranyl diphosphate|(2E,6E,10E)-geranylgeranyl diphosphate|ω,E,E,E-geranylgeranyl diphosphate|(2E,6E,10E)-3,7,11,15-tetramethylhexadeca-2,6,10,14-tetraen-1-yl diphosphate|all-trans-geranylgeranyl diphosphate|2-trans,6-trans,10-trans-geranylgeranyl diphosphate}}
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** [http://www.uniprot.org/uniprot/P00432 P00432]
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{{#set: consumed by=RXN-10441|RXN-7663|RXN-10625|2.5.1.41-RXN|RXN-11486}}
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** [http://www.uniprot.org/uniprot/P15202 P15202]
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{{#set: produced by=FARNESYLTRANSTRANSFERASE-RXN}}
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** [http://www.uniprot.org/uniprot/P06115 P06115]
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{{#set: reversible reaction associated=RXN-7673|RXN-7658|RXN-3701}}
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** [http://www.uniprot.org/uniprot/P07820 P07820]
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** [http://www.uniprot.org/uniprot/P17750 P17750]
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** [http://www.uniprot.org/uniprot/P13029 P13029]
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** [http://www.uniprot.org/uniprot/P17336 P17336]
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** [http://www.uniprot.org/uniprot/P04040 P04040]
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** [http://www.uniprot.org/uniprot/P25890 P25890]
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** [http://www.uniprot.org/uniprot/P04762 P04762]
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** [http://www.uniprot.org/uniprot/P29756 P29756]
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** [http://www.uniprot.org/uniprot/P44390 P44390]
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** [http://www.uniprot.org/uniprot/P42234 P42234]
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** [http://www.uniprot.org/uniprot/Q9JRF5 Q9JRF5]
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** [http://www.uniprot.org/uniprot/P94377 P94377]
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** [http://www.uniprot.org/uniprot/Q9ZKX5 Q9ZKX5]
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** [http://www.uniprot.org/uniprot/Q59296 Q59296]
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** [http://www.uniprot.org/uniprot/P55306 P55306]
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** [http://www.uniprot.org/uniprot/P26901 P26901]
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** [http://www.uniprot.org/uniprot/P14412 P14412]
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** [http://www.uniprot.org/uniprot/P07145 P07145]
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** [http://www.uniprot.org/uniprot/P17598 P17598]
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** [http://www.uniprot.org/uniprot/Q41136 Q41136]
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** [http://www.uniprot.org/uniprot/P30567 P30567]
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** [http://www.uniprot.org/uniprot/P30263 P30263]
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** [http://www.uniprot.org/uniprot/P29422 P29422]
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** [http://www.uniprot.org/uniprot/P30266 P30266]
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** [http://www.uniprot.org/uniprot/P37743 P37743]
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** [http://www.uniprot.org/uniprot/P33569 P33569]
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** [http://www.uniprot.org/uniprot/P18123 P18123]
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** [http://www.uniprot.org/uniprot/P55303 P55303]
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** [http://www.uniprot.org/uniprot/Q01297 Q01297]
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** [http://www.uniprot.org/uniprot/P49318 P49318]
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** [http://www.uniprot.org/uniprot/P18122 P18122]
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** [http://www.uniprot.org/uniprot/P49315 P49315]
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** [http://www.uniprot.org/uniprot/Q27710 Q27710]
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** [http://www.uniprot.org/uniprot/P45739 P45739]
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** [http://www.uniprot.org/uniprot/P0A323 P0A323]
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** [http://www.uniprot.org/uniprot/P55307 P55307]
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** [http://www.uniprot.org/uniprot/P55308 P55308]
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** [http://www.uniprot.org/uniprot/P55305 P55305]
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** [http://www.uniprot.org/uniprot/P50979 P50979]
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** [http://www.uniprot.org/uniprot/Q55110 Q55110]
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** [http://www.uniprot.org/uniprot/P12365 P12365]
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** [http://www.uniprot.org/uniprot/P73911 P73911]
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** [http://www.uniprot.org/uniprot/P77038 P77038]
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** [http://www.uniprot.org/uniprot/P25819 P25819]
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** [http://www.uniprot.org/uniprot/O48562 O48562]
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** [http://www.uniprot.org/uniprot/Q43206 Q43206]
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** [http://www.uniprot.org/uniprot/O22472 O22472]
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** [http://www.uniprot.org/uniprot/P30265 P30265]
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** [http://www.uniprot.org/uniprot/P48351 P48351]
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** [http://www.uniprot.org/uniprot/P48352 P48352]
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** [http://www.uniprot.org/uniprot/Q39633 Q39633]
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** [http://www.uniprot.org/uniprot/Q39634 Q39634]
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** [http://www.uniprot.org/uniprot/P32290 P32290]
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** [http://www.uniprot.org/uniprot/O81336 O81336]
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** [http://www.uniprot.org/uniprot/O81337 O81337]
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** [http://www.uniprot.org/uniprot/P49317 P49317]
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** [http://www.uniprot.org/uniprot/Q27487 Q27487]
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** [http://www.uniprot.org/uniprot/Q8MYL7 Q8MYL7]
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** [http://www.uniprot.org/uniprot/Q9Z598 Q9Z598]
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** [http://www.uniprot.org/uniprot/O61235 O61235]
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** [http://www.uniprot.org/uniprot/O33613 O33613]
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** [http://www.uniprot.org/uniprot/P77948 P77948]
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** [http://www.uniprot.org/uniprot/O73955 O73955]
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** [http://www.uniprot.org/uniprot/O59651 O59651]
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** [http://www.uniprot.org/uniprot/O31066 O31066]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: ec number=EC-1.11.1.6}}
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{{#set: ec number=EC-1.11.1.21}}
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{{#set: gene associated=CHC_T00007915001_1}}
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{{#set: in pathway=PWY-5506|DETOX1-PWY-1|DETOX1-PWY}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=galdieria.sulphuraria|a.taliana}}
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Revision as of 15:47, 23 May 2018

Metabolite GERANYLGERANYL-PP

  • smiles:
    • CC(C)=CCCC(C)=CCCC(C)=CCCC(C)=CCOP(=O)([O-])OP(=O)([O-])[O-]
  • inchi key:
    • InChIKey=OINNEUNVOZHBOX-QIRCYJPOSA-K
  • common name:
    • geranylgeranyl diphosphate
  • molecular weight:
    • 447.424
  • Synonym(s):
    • all-trans-geranyl-geranyl-pp
    • geranylgeranyl-PP
    • GGPP
    • geranylgeranyl diphosphate
    • (2E,6E,10E)-geranylgeranyl diphosphate
    • ω,E,E,E-geranylgeranyl diphosphate
    • (2E,6E,10E)-3,7,11,15-tetramethylhexadeca-2,6,10,14-tetraen-1-yl diphosphate
    • all-trans-geranylgeranyl diphosphate
    • 2-trans,6-trans,10-trans-geranylgeranyl diphosphate

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • DRUGBANK : DB07841
  • PUBCHEM:
  • HMDB : HMDB04486
  • LIGAND-CPD:
  • CHEMSPIDER:
  • CHEBI:
  • METABOLIGHTS : MTBLC58756
"CC(C)=CCCC(C)=CCCC(C)=CCCC(C)=CCOP(=O)([O-])OP(=O)([O-])[O-" cannot be used as a page name in this wiki.




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