Difference between revisions of "GLURS-RXN"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=5Z13E-15S-1115-DIHYDROXY-9-OXOPROS 5Z13E-15S-1115-DIHYDROXY-9-OXOPROS] == * smiles: ** CCCCCC(O...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLURS-RXN GLURS-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=5Z13E-15S-1115-DIHYDROXY-9-OXOPROS 5Z13E-15S-1115-DIHYDROXY-9-OXOPROS] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLURS-RXN GLURS-RXN] ==
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* smiles:
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* direction:
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** CCCCCC(O)C=CC1(C(CC=CCCCC(=O)[O-])C(=O)CC(O)1)
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** LEFT-TO-RIGHT
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* inchi key:
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* ec number:
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** InChIKey=XEYBRNLFEZDVAW-COHNOYJASA-M
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** [http://enzyme.expasy.org/EC/6.1.1.17 EC-6.1.1.17]
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* common name:
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** prostaglandin E2
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* molecular weight:
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** 351.462   
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* Synonym(s):
 
* Synonym(s):
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** dinoprostone
 
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** (5Z,13E)-(15S)-11α15-dihydroxy-9-oxoprost-13-enoate
 
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** prostglandin E2
 
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** (5Z,13E)-(15S)-11,15-dihydroxy-9-oxoprosta-5,13-dienoate
 
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** PGE2
 
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** Prostglandin E2
 
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** (5Z,13E)-(15S)-11α,15-dihydroxy-9-oxoprosta-5,13-dienoate
 
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** (5Z,13E)-(15S)-11α15-Dihydroxy-9-oxoprost-13-enoate
 
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** Dinoprostone
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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== Reaction(s) known to produce the compound ==
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* With identifiers:
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* [[PROSTAGLANDIN-E-SYNTHASE-RXN]]
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** 1 [[GLT]][c] '''+''' 1 [[GLT-tRNAs]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[Charged-GLT-tRNAs]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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** 1 L-glutamate[c] '''+''' 1 a tRNAglu[c] '''+''' 1 ATP[c] '''=>''' 1 AMP[c] '''+''' 1 diphosphate[c] '''+''' 1 an L-glutamyl-[tRNAGlu][c]
 +
 
 +
== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[CHC_T00002361001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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* Gene: [[CHC_T00008453001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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== Pathways  ==
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* [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
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** '''21''' reactions found over '''21''' reactions in the full pathway
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* [[PWY-5188]], tetrapyrrole biosynthesis I (from glutamate): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5188 PWY-5188]
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** '''6''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-galdieria.sulphuraria]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
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* DRUGBANK : DB00917
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* RHEA:
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* NCI:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23540 23540]
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** [http://cactus.nci.nih.gov/ncidb2.2/?nsc=196514 196514]
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* LIGAND-RXN:
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* CAS : 363-24-6
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** [http://www.genome.jp/dbget-bin/www_bget?R05578 R05578]
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* LIPID_MAPS : LMFA03010003
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* UNIPROT:
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* PUBCHEM:
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** [http://www.uniprot.org/uniprot/P47700 P47700]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=91820204 91820204]
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** [http://www.uniprot.org/uniprot/O52914 O52914]
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* HMDB : HMDB01220
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** [http://www.uniprot.org/uniprot/P43818 P43818]
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* LIGAND-CPD:
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** [http://www.uniprot.org/uniprot/O26157 O26157]
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** [http://www.genome.jp/dbget-bin/www_bget?C00584 C00584]
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** [http://www.uniprot.org/uniprot/Q9ZLJ1 Q9ZLJ1]
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* CHEBI:
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** [http://www.uniprot.org/uniprot/O25360 O25360]
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=15551 15551]
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** [http://www.uniprot.org/uniprot/O51345 O51345]
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* METABOLIGHTS : MTBLC15551
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** [http://www.uniprot.org/uniprot/Q9Z7Z3 Q9Z7Z3]
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{{#set: smiles=CCCCCC(O)C=CC1(C(CC=CCCCC(=O)[O-])C(=O)CC(O)1)}}
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** [http://www.uniprot.org/uniprot/P96551 P96551]
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{{#set: inchi key=InChIKey=XEYBRNLFEZDVAW-COHNOYJASA-M}}
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** [http://www.uniprot.org/uniprot/O67271 O67271]
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{{#set: common name=prostaglandin E2}}
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** [http://www.uniprot.org/uniprot/O83679 O83679]
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{{#set: molecular weight=351.462    }}
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** [http://www.uniprot.org/uniprot/Q9ZLZ7 Q9ZLZ7]
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{{#set: common name=dinoprostone|(5Z,13E)-(15S)-11α15-dihydroxy-9-oxoprost-13-enoate|prostglandin E2|(5Z,13E)-(15S)-11,15-dihydroxy-9-oxoprosta-5,13-dienoate|PGE2|Prostglandin E2|(5Z,13E)-(15S)-11α,15-dihydroxy-9-oxoprosta-5,13-dienoate|(5Z,13E)-(15S)-11α15-Dihydroxy-9-oxoprost-13-enoate|Dinoprostone}}
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** [http://www.uniprot.org/uniprot/Q9PP78 Q9PP78]
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{{#set: produced by=PROSTAGLANDIN-E-SYNTHASE-RXN}}
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** [http://www.uniprot.org/uniprot/Q9CDZ7 Q9CDZ7]
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** [http://www.uniprot.org/uniprot/O84451 O84451]
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** [http://www.uniprot.org/uniprot/Q9X2I8 Q9X2I8]
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** [http://www.uniprot.org/uniprot/Q9JWT4 Q9JWT4]
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** [http://www.uniprot.org/uniprot/Q9ZDK3 Q9ZDK3]
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** [http://www.uniprot.org/uniprot/Q9X172 Q9X172]
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** [http://www.uniprot.org/uniprot/Q58772 Q58772]
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** [http://www.uniprot.org/uniprot/Q9ZCT8 Q9ZCT8]
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** [http://www.uniprot.org/uniprot/P59690 P59690]
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** [http://www.uniprot.org/uniprot/Q43768 Q43768]
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** [http://www.uniprot.org/uniprot/Q43794 Q43794]
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** [http://www.uniprot.org/uniprot/P46655 P46655]
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** [http://www.uniprot.org/uniprot/P48525 P48525]
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** [http://www.uniprot.org/uniprot/P75114 P75114]
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** [http://www.uniprot.org/uniprot/Q49061 Q49061]
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** [http://www.uniprot.org/uniprot/P22249 P22249]
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** [http://www.uniprot.org/uniprot/P22250 P22250]
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** [http://www.uniprot.org/uniprot/P04805 P04805]
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** [http://www.uniprot.org/uniprot/P07814 P07814]
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** [http://www.uniprot.org/uniprot/P15189 P15189]
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** [http://www.uniprot.org/uniprot/O65253 O65253]
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** [http://www.uniprot.org/uniprot/O68055 O68055]
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** [http://www.uniprot.org/uniprot/O68142 O68142]
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** [http://www.uniprot.org/uniprot/O86528 O86528]
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** [http://www.uniprot.org/uniprot/O13775 O13775]
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** [http://www.uniprot.org/uniprot/Q9ZFA3 Q9ZFA3]
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** [http://www.uniprot.org/uniprot/O82462 O82462]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: ec number=EC-6.1.1.17}}
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{{#set: gene associated=CHC_T00002361001_1|CHC_T00008453001_1}}
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{{#set: in pathway=TRNA-CHARGING-PWY|PWY-5188}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-ectocarpus_siliculosus|orthology-galdieria.sulphuraria}}
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{{#set: reconstruction tool=pantograph}}

Revision as of 15:50, 23 May 2018

Reaction GLURS-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 L-glutamate[c] + 1 a tRNAglu[c] + 1 ATP[c] => 1 AMP[c] + 1 diphosphate[c] + 1 an L-glutamyl-[tRNAGlu][c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=GLURS-RXN&oldid=15481"