Difference between revisions of "PWY-6733"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=4.2.1.58-RXN 4.2.1.58-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** (3R)-3-hydroxybutanoy...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6733 PWY-6733] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3193 TAX-31...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=4.2.1.58-RXN 4.2.1.58-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6733 PWY-6733] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3193 TAX-3193]
 
* common name:
 
* common name:
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** (3R)-3-hydroxybutanoyl-[acyl-carrier-protein] hydratase
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** sporopollenin precursors biosynthesis
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* ec number:
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** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86]
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** [http://enzyme.expasy.org/EC/2.3.1.85 EC-2.3.1.85]
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** [http://enzyme.expasy.org/EC/4.2.1.59 EC-4.2.1.59]
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* Synonym(s):
 
* Synonym(s):
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** crotonoyl-[acyl-carrier-protein] hydratase
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** sporopollenin monomer biosynthesis
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** β-hydroxybutyryl acyl carrier protein (ACP) dehydrase
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** β-hydroxybutyryl acyl carrier protein dehydrase
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** enoyl acyl carrier protein hydrase
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** crotonyl acyl carrier protein hydratase
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** 3-hydroxybutyryl acyl carrier protein dehydratase
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** β-hydroxybutyryl acyl carrier  protein dehydrase
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** (3R)-3-hydroxybutanoyl-[acyl-carrier-protein] hydro-lyase (but-2-enoyl-[acyl-carrier protein]-forming)
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** (3R)-3-hydroxybutanoyl-[acyl-carrier-protein] hydro-lyase
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''5''' reactions found over '''18''' reactions in the full pathway
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** 1 [[Beta-3-hydroxybutyryl-ACPs]][c] '''=>''' 1 [[Crotonyl-ACPs]][c] '''+''' 1 [[WATER]][c]
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* [[RXN-12184]]
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* With common name(s):
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** 6 associated gene(s):
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** 1 a (3R)-3-hydroxybutanoyl-[acp][c] '''=>''' 1 a crotonyl-[acp][c] '''+''' 1 H2O[c]
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*** [[CHC_T00009428001]]
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*** [[CHC_T00008811001_1]]
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== Genes associated with this reaction  ==
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*** [[CHC_T00008160001_1]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[CHC_T00008811001]]
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* [[CHC_T00009190001_1]]
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*** [[CHC_T00009428001_1]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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*** [[CHC_T00008500001_1]]
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== Pathways  ==
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** 3 reconstruction source(s) associated:
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* [[PWY-5971]], palmitate biosynthesis II (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5971 PWY-5971]
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*** [[annotation-original_genome]]
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** '''31''' reactions found over '''31''' reactions in the full pathway
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*** [[orthology-ectocarpus_siliculosus]]
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* [[PWY-5994]], palmitate biosynthesis I (animals and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5994 PWY-5994]
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*** [[orthology-galdieria.sulphuraria]]
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** '''22''' reactions found over '''31''' reactions in the full pathway
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* [[RXN-16389]]
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* [[PWY-7388]], octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7388 PWY-7388]
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** 6 associated gene(s):
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** '''8''' reactions found over '''9''' reactions in the full pathway
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*** [[CHC_T00008500001_1]]
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== Reconstruction information  ==
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*** [[CHC_T00009428001]]
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* [[orthology]]:
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*** [[CHC_T00008811001_1]]
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** [[pantograph]]:
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*** [[CHC_T00009428001_1]]
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*** [[galdieria.sulphuraria]]
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*** [[CHC_T00008160001_1]]
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*** [[CHC_T00008811001]]
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** 3 reconstruction source(s) associated:
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*** [[annotation-original_genome]]
 +
*** [[orthology-ectocarpus_siliculosus]]
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*** [[orthology-galdieria.sulphuraria]]
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* [[RXN-16401]]
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** 6 associated gene(s):
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*** [[CHC_T00008811001_1]]
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*** [[CHC_T00008160001_1]]
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*** [[CHC_T00009428001_1]]
 +
*** [[CHC_T00009428001]]
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*** [[CHC_T00008500001_1]]
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*** [[CHC_T00008811001]]
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** 3 reconstruction source(s) associated:
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*** [[annotation-original_genome]]
 +
*** [[orthology-ectocarpus_siliculosus]]
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*** [[orthology-galdieria.sulphuraria]]
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* [[RXN-16402]]
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** 6 associated gene(s):
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*** [[CHC_T00008500001_1]]
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*** [[CHC_T00008811001]]
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*** [[CHC_T00009428001_1]]
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*** [[CHC_T00008160001_1]]
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*** [[CHC_T00009428001]]
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*** [[CHC_T00008811001_1]]
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** 3 reconstruction source(s) associated:
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*** [[annotation-original_genome]]
 +
*** [[orthology-ectocarpus_siliculosus]]
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*** [[orthology-galdieria.sulphuraria]]
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* [[RXN-9666]]
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** 0 associated gene:
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** 1 reconstruction source(s) associated:
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*** [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=PALMITOYL-COA-HYDROLASE-RXN PALMITOYL-COA-HYDROLASE-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12186 RXN-12186]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16398 RXN-16398]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16399 RXN-16399]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16400 RXN-16400]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16403 RXN-16403]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16404 RXN-16404]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16405 RXN-16405]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16406 RXN-16406]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16407 RXN-16407]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16408 RXN-16408]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9624 RXN-9624]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9627 RXN-9627]
 
== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-3193}}
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** [http://www.genome.jp/dbget-bin/www_bget?R04428 R04428]
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{{#set: common name=sporopollenin precursors biosynthesis}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=sporopollenin monomer biosynthesis}}
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{{#set: common name=(3R)-3-hydroxybutanoyl-[acyl-carrier-protein] hydratase}}
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{{#set: reaction found=5}}
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{{#set: ec number=EC-2.3.1.86}}
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{{#set: total reaction=18}}
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{{#set: ec number=EC-2.3.1.85}}
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{{#set: completion rate=28.0}}
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{{#set: ec number=EC-4.2.1.59}}
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−
{{#set: common name=crotonoyl-[acyl-carrier-protein] hydratase|β-hydroxybutyryl acyl carrier protein (ACP) dehydrase|β-hydroxybutyryl acyl carrier protein dehydrase|enoyl acyl carrier protein hydrase|crotonyl acyl carrier protein hydratase|3-hydroxybutyryl acyl carrier protein dehydratase|β-hydroxybutyryl acyl carrier  protein dehydrase|(3R)-3-hydroxybutanoyl-[acyl-carrier-protein] hydro-lyase (but-2-enoyl-[acyl-carrier protein]-forming)|(3R)-3-hydroxybutanoyl-[acyl-carrier-protein] hydro-lyase}}
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−
{{#set: gene associated=CHC_T00009190001_1}}
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−
{{#set: in pathway=PWY-5971|PWY-5994|PWY-7388}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=galdieria.sulphuraria}}
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Revision as of 16:56, 23 May 2018

Pathway PWY-6733

  • taxonomic range:
  • common name:
    • sporopollenin precursors biosynthesis
  • Synonym(s):
    • sporopollenin monomer biosynthesis

Reaction(s) found

5 reactions found over 18 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=PWY-6733&oldid=15764"