Difference between revisions of "RXN-13445"

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(Created page with "Category:Gene == Gene CHC_T00008521001 == * left end position: ** 49917 * transcription direction: ** POSITIVE * right end position: ** 51443 * centisome position: ** 11.2...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13445 RXN-13445] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene CHC_T00008521001 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13445 RXN-13445] ==
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* left end position:
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* direction:
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** 49917
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** LEFT-TO-RIGHT
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* transcription direction:
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* ec number:
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** POSITIVE
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** [http://enzyme.expasy.org/EC/1.3.1.93 EC-1.3.1.93]
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* right end position:
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** 51443
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* centisome position:
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** 11.244695   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[PROTEIN-KINASE-RXN]]
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* With identifiers:
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** original_genome
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** 1 [[CPD-14425]][c] '''+''' 1 [[Donor-H2]][c] '''=>''' 1 [[Acceptor]][c] '''+''' 1 [[CPD-14426]][c]
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***automated-name-match
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* With common name(s):
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== Pathways associated ==
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** 1 (2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA[c] '''+''' 1 a reduced electron acceptor[c] '''=>''' 1 an oxidized electron acceptor[c] '''+''' 1 docosapentaenoyl-CoA[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[CHC_T00001929001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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* Gene: [[CHC_T00000701001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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* Gene: [[CHC_T00005019001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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* Gene: [[CHC_T00004718001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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* Gene: [[CHC_T00000757001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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* Gene: [[CHC_T00006026001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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* Gene: [[CHC_T00003552001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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* Gene: [[CHC_T00001951001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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* Gene: [[CHC_T00006926001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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== Pathways ==
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* [[PWY-7053]], docosahexaenoate biosynthesis I (lower eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7053 PWY-7053]
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** '''4''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-7606]], docosahexaenoate biosynthesis III (6-desaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7606 PWY-7606]
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** '''7''' reactions found over '''14''' reactions in the full pathway
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* [[PWY-7727]], docosahexaenoate biosynthesis IV (4-desaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7727 PWY-7727]
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** '''3''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-galdieria.sulphuraria]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=49917}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: ec number=EC-1.3.1.93}}
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{{#set: right end position=51443}}
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{{#set: gene associated=CHC_T00001929001_1|CHC_T00000701001_1|CHC_T00005019001_1|CHC_T00004718001_1|CHC_T00000757001_1|CHC_T00006026001_1|CHC_T00003552001_1|CHC_T00001951001_1|CHC_T00006926001_1}}
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{{#set: centisome position=11.244695    }}
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{{#set: in pathway=PWY-7053|PWY-7606|PWY-7727}}
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{{#set: reaction associated=PROTEIN-KINASE-RXN}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-galdieria.sulphuraria}}
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{{#set: reconstruction tool=pantograph}}

Revision as of 15:57, 23 May 2018

Reaction RXN-13445

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 (2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA[c] + 1 a reduced electron acceptor[c] => 1 an oxidized electron acceptor[c] + 1 docosapentaenoyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7053, docosahexaenoate biosynthesis I (lower eukaryotes): PWY-7053
    • 4 reactions found over 7 reactions in the full pathway
  • PWY-7606, docosahexaenoate biosynthesis III (6-desaturase, mammals): PWY-7606
    • 7 reactions found over 14 reactions in the full pathway
  • PWY-7727, docosahexaenoate biosynthesis IV (4-desaturase, mammals): PWY-7727
    • 3 reactions found over 6 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=RXN-13445&oldid=15820"