Difference between revisions of "CHC T00008589001"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11501 RXN-11501] == * direction: ** LEFT-TO-RIGHT * common name: ** alpha-galactosidase * ec nu...")
(Created page with "Category:Gene == Gene CHC_T00008589001 == * left end position: ** 9386 * transcription direction: ** NEGATIVE * right end position: ** 11857 * centisome position: ** 5.370...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11501 RXN-11501] ==
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== Gene CHC_T00008589001 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 9386
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* common name:
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* transcription direction:
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** alpha-galactosidase
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** NEGATIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/3.2.1.22 EC-3.2.1.22]
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** 11857
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* centisome position:
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** 5.3705482   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[PROTEIN-KINASE-RXN]]
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** 1 [[CPD-170]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[ALPHA-D-GALACTOSE]][c] '''+''' 1 [[CPD-1099]][c]
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** Source: [[annotation-original_genome]]
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* With common name(s):
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*** Assignment: automated-name-match
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** 1 stachyose[c] '''+''' 1 H2O[c] '''=>''' 1 α-D-galactose[c] '''+''' 1 raffinose[c]
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== Pathways associated ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[CHC_T00008413001]]
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** ORIGINAL_GENOME
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***AUTOMATED-NAME-MATCH
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* [[CHC_T00008413001_1]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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== Pathways ==
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* [[PWY-6527]], stachyose degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6527 PWY-6527]
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** '''7''' reactions found over '''7''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[galdieria.sulphuraria]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[original_genome]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: left end position=9386}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03634 R03634]
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{{#set: transcription direction=NEGATIVE}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=11857}}
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{{#set: common name=alpha-galactosidase}}
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{{#set: centisome position=5.3705482    }}
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{{#set: ec number=EC-3.2.1.22}}
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{{#set: reaction associated=PROTEIN-KINASE-RXN}}
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{{#set: gene associated=CHC_T00008413001|CHC_T00008413001_1}}
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{{#set: in pathway=PWY-6527}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=galdieria.sulphuraria}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=original_genome}}
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Latest revision as of 17:03, 23 May 2018

Gene CHC_T00008589001

  • left end position:
    • 9386
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 11857
  • centisome position:
    • 5.3705482
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=CHC_T00008589001&oldid=16007"