Difference between revisions of "RXN-14785"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16066 RXN-16066] == * direction: ** REVERSIBLE * common name: ** 1-acyl-sn-glycerol-3-phosphate...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14785 RXN-14785] == * direction: ** LEFT-TO-RIGHT * common name: ** acyl-CoA oxidase * ec numbe...") |
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Line 1: | Line 1: | ||
[[Category:Reaction]] | [[Category:Reaction]] | ||
− | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN- | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14785 RXN-14785] == |
* direction: | * direction: | ||
− | ** | + | ** LEFT-TO-RIGHT |
* common name: | * common name: | ||
− | ** | + | ** acyl-CoA oxidase |
− | + | ||
* ec number: | * ec number: | ||
− | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/1.3.3.6 EC-1.3.3.6] |
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
− | ** 1 [[ | + | ** 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[CPD-15651]][c] '''=>''' 1 [[CPD-15675]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c] |
* With common name(s): | * With common name(s): | ||
− | ** 1 | + | ** 1 oxygen[c] '''+''' 1 6-trans-tridecenoyl-CoA[c] '''=>''' 1 2-trans-6-trans-tridecadienoyl-CoA[c] '''+''' 1 hydrogen peroxide[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
− | * [[ | + | * Gene: [[CHC_T00008400001_1]] |
− | ** | + | ** Source: [[orthology-galdieria.sulphuraria]] |
− | ***AUTOMATED-NAME-MATCH | + | ** Source: [[orthology-ectocarpus_siliculosus]] |
− | * [[ | + | * Gene: [[CHC_T00009531001]] |
− | ** [[ | + | ** Source: [[annotation-original_genome]] |
− | * [[ | + | *** Assignment: AUTOMATED-NAME-MATCH |
− | ** | + | * Gene: [[CHC_T00008478001_1]] |
− | ***AUTOMATED-NAME-MATCH | + | ** Source: [[orthology-galdieria.sulphuraria]] |
− | * [[ | + | ** Source: [[orthology-ectocarpus_siliculosus]] |
− | ** | + | * Gene: [[CHC_T00008935001_1]] |
− | *** | + | ** Source: [[orthology-galdieria.sulphuraria]] |
− | * [[ | + | ** Source: [[orthology-ectocarpus_siliculosus]] |
− | ** | + | * Gene: [[CHC_T00008400001]] |
− | ***AUTOMATED-NAME-MATCH | + | ** Source: [[annotation-original_genome]] |
− | * [[ | + | *** Assignment: AUTOMATED-NAME-MATCH |
− | ** | + | * Gene: [[CHC_T00007910001_1]] |
− | ***AUTOMATED-NAME-MATCH | + | ** Source: [[orthology-galdieria.sulphuraria]] |
+ | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
+ | * Gene: [[CHC_T00009531001_1]] | ||
+ | ** Source: [[orthology-galdieria.sulphuraria]] | ||
+ | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
+ | * Gene: [[CHC_T00008935001]] | ||
+ | ** Source: [[annotation-original_genome]] | ||
+ | *** Assignment: AUTOMATED-NAME-MATCH | ||
+ | * Gene: [[CHC_T00009142001]] | ||
+ | ** Source: [[annotation-original_genome]] | ||
+ | *** Assignment: AUTOMATED-NAME-MATCH | ||
+ | * Gene: [[CHC_T00009142001_1]] | ||
+ | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
== Pathways == | == Pathways == | ||
+ | * [[PWY-7338]], 10-trans-heptadecenoyl-CoA degradation (reductase-dependent, yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7338 PWY-7338] | ||
+ | ** '''3''' reactions found over '''12''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
− | * [[orthology]]: | + | * Category: [[orthology]] |
− | ** [[pantograph]] | + | ** Source: [[orthology-ectocarpus_siliculosus]] |
− | ** | + | *** Tool: [[pantograph]] |
− | * [[ | + | ** Source: [[orthology-galdieria.sulphuraria]] |
− | ** [[ | + | *** Tool: [[pantograph]] |
− | *** [[ | + | * Category: [[annotation]] |
+ | ** Source: [[annotation-original_genome]] | ||
+ | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
− | {{#set: direction= | + | {{#set: direction=LEFT-TO-RIGHT}} |
− | {{#set: common name= | + | {{#set: common name=acyl-CoA oxidase}} |
− | + | {{#set: ec number=EC-1.3.3.6}} | |
− | {{#set: ec number=EC- | + | {{#set: gene associated=CHC_T00008400001_1|CHC_T00009531001|CHC_T00008478001_1|CHC_T00008935001_1|CHC_T00008400001|CHC_T00007910001_1|CHC_T00009531001_1|CHC_T00008935001|CHC_T00009142001|CHC_T00009142001_1}} |
− | {{#set: gene associated= | + | {{#set: in pathway=PWY-7338}} |
− | {{#set: in pathway=}} | + | {{#set: reconstruction category=orthology|annotation}} |
− | {{#set: reconstruction category=orthology | + | {{#set: reconstruction source=annotation-original_genome|orthology-ectocarpus_siliculosus|orthology-galdieria.sulphuraria}} |
− | + | {{#set: reconstruction tool=pantograph|pathwaytools}} | |
− | {{#set: reconstruction source=galdieria.sulphuraria | + | |
− | + | ||
− | {{#set: reconstruction tool=pathwaytools | + | |
− | + |
Revision as of 16:05, 23 May 2018
Contents
Reaction RXN-14785
- direction:
- LEFT-TO-RIGHT
- common name:
- acyl-CoA oxidase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 OXYGEN-MOLECULE[c] + 1 CPD-15651[c] => 1 CPD-15675[c] + 1 HYDROGEN-PEROXIDE[c]
- With common name(s):
- 1 oxygen[c] + 1 6-trans-tridecenoyl-CoA[c] => 1 2-trans-6-trans-tridecadienoyl-CoA[c] + 1 hydrogen peroxide[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: CHC_T00008400001_1
- Source: orthology-galdieria.sulphuraria
- Source: orthology-ectocarpus_siliculosus
- Gene: CHC_T00009531001
- Source: annotation-original_genome
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-original_genome
- Gene: CHC_T00008478001_1
- Source: orthology-galdieria.sulphuraria
- Source: orthology-ectocarpus_siliculosus
- Gene: CHC_T00008935001_1
- Source: orthology-galdieria.sulphuraria
- Source: orthology-ectocarpus_siliculosus
- Gene: CHC_T00008400001
- Source: annotation-original_genome
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-original_genome
- Gene: CHC_T00007910001_1
- Source: orthology-galdieria.sulphuraria
- Source: orthology-ectocarpus_siliculosus
- Gene: CHC_T00009531001_1
- Source: orthology-galdieria.sulphuraria
- Source: orthology-ectocarpus_siliculosus
- Gene: CHC_T00008935001
- Source: annotation-original_genome
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-original_genome
- Gene: CHC_T00009142001
- Source: annotation-original_genome
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-original_genome
- Gene: CHC_T00009142001_1
- Source: orthology-ectocarpus_siliculosus
Pathways
- PWY-7338, 10-trans-heptadecenoyl-CoA degradation (reductase-dependent, yeast): PWY-7338
- 3 reactions found over 12 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-galdieria.sulphuraria
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Category: annotation
- Source: annotation-original_genome
- Tool: pathwaytools
- Source: annotation-original_genome