Difference between revisions of "RXN0-2382"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=3-HYDROXY-ISOBUTYRYL-COA 3-HYDROXY-ISOBUTYRYL-COA] == * common name: ** 3-hydroxy-isobutanoyl-C...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-2382 RXN0-2382] == * direction: ** LEFT-TO-RIGHT * common name: ** tryptophan synthase alpha c...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=3-HYDROXY-ISOBUTYRYL-COA 3-HYDROXY-ISOBUTYRYL-COA] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-2382 RXN0-2382] ==
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* direction:
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
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** 3-hydroxy-isobutanoyl-CoA
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** tryptophan synthase alpha chain
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** Tryptophan synthase subunit beta
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* ec number:
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** [http://enzyme.expasy.org/EC/4.2.1.122 EC-4.2.1.122]
 
* Synonym(s):
 
* Synonym(s):
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** 3-Hydroxy-2-methylpropanoyl-CoA
 
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** 3-hydroxy-isobutyryl-coenzyme A
 
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** 3-hydroxy-2-methylpropionyl-CoA
 
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** 3-hydroxy-isobutyryl-CoA
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[RXN-13721]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[INDOLE]][c] '''+''' 1 [[SER]][c] '''=>''' 1 [[TRP]][c] '''+''' 1 [[WATER]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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** 1 indole[c] '''+''' 1 L-serine[c] '''=>''' 1 L-tryptophan[c] '''+''' 1 H2O[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[CHC_T00007475001_1]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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* Gene: [[CHC_T00008705001_1]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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* Gene: [[CHC_T00008746001_1]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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* Gene: [[CHC_1120]]
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** Source: [[annotation-original_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[CHC_T00008401001]]
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** Source: [[annotation-original_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[CHC_T00009102001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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* Gene: [[CHC_T00008842001_1]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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== Pathways  ==
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* [[TRPSYN-PWY]], L-tryptophan biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=TRPSYN-PWY TRPSYN-PWY]
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** '''6''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-galdieria.sulphuraria]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-original_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: common name=3-hydroxy-isobutanoyl-CoA}}
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* RHEA:
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{{#set: common name=3-Hydroxy-2-methylpropanoyl-CoA|3-hydroxy-isobutyryl-coenzyme A|3-hydroxy-2-methylpropionyl-CoA|3-hydroxy-isobutyryl-CoA}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=26434 26434]
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{{#set: consumed by=RXN-13721}}
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R00674 R00674]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=tryptophan synthase alpha chain}}
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{{#set: common name=Tryptophan synthase subunit beta}}
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{{#set: ec number=EC-4.2.1.122}}
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{{#set: gene associated=CHC_T00007475001_1|CHC_T00008705001_1|CHC_T00008746001_1|CHC_1120|CHC_T00008401001|CHC_T00009102001_1|CHC_T00008842001_1}}
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{{#set: in pathway=TRPSYN-PWY}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-original_genome|orthology-ectocarpus_siliculosus|orthology-galdieria.sulphuraria}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 16:08, 23 May 2018

Reaction RXN0-2382

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • tryptophan synthase alpha chain
    • Tryptophan synthase subunit beta
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 indole[c] + 1 L-serine[c] => 1 L-tryptophan[c] + 1 H2O[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • TRPSYN-PWY, L-tryptophan biosynthesis: TRPSYN-PWY
    • 6 reactions found over 6 reactions in the full pathway

Reconstruction information

External links





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