Difference between revisions of "P124-PWY"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TransportSeed_NAD TransportSeed_NAD] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Fo...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=P124-PWY P124-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-201174 TAX-...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=TransportSeed_NAD TransportSeed_NAD] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=P124-PWY P124-PWY] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-201174 TAX-201174]
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* common name:
 +
** Bifidobacterium shunt
 
* Synonym(s):
 
* Synonym(s):
 +
** Bifidum fermentation
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** Bifidum pathway
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** fructose-6-phosphate pathway
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** Bifidum shunt
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** glucose fermentation to lactate (Bifidobacteria)
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''11''' reactions found over '''15''' reactions in the full pathway
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** 1.0 [[NAD]][e] '''=>''' 1.0 [[NAD]][c]
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* [[1TRANSKETO-RXN]]
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* With common name(s):
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** 2 associated gene(s):
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** 1.0 NAD+[e] '''=>''' 1.0 NAD+[c]
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*** [[CHC_T00009390001_1]]
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*** [[CHC_T00005040001_1]]
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== Genes associated with this reaction  ==
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** 3 reconstruction source(s) associated:
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== Pathways  ==
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*** [[orthology-arabidopsis_thaliana]]
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== Reconstruction information  ==
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*** [[orthology-ectocarpus_siliculosus]]
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* [[manual]]:
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*** [[orthology-galdieria.sulphuraria]]
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** [[added to manage seeds from extracellular to cytosol compartment]]
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* [[2PGADEHYDRAT-RXN]]
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** 5 associated gene(s):
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*** [[CHC_T00008696001]]
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*** [[CHC_T00008696001_1]]
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*** [[CHC_T00009127001_1]]
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*** [[CHC_T00008490001]]
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*** [[CHC_T00009127001]]
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** 4 reconstruction source(s) associated:
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*** [[annotation-original_genome]]
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*** [[orthology-arabidopsis_thaliana]]
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*** [[orthology-ectocarpus_siliculosus]]
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*** [[orthology-galdieria.sulphuraria]]
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* [[3PGAREARR-RXN]]
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** 6 associated gene(s):
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*** [[CHC_T00001519001_1]]
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*** [[CHC_T00004490001_1]]
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*** [[CHC_T00004201001_1]]
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*** [[CHC_T00007707001_1]]
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*** [[CHC_T00000449001_1]]
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*** [[CHC_T00001241001_1]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-arabidopsis_thaliana]]
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*** [[orthology-ectocarpus_siliculosus]]
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*** [[orthology-galdieria.sulphuraria]]
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* [[GAPOXNPHOSPHN-RXN]]
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** 2 associated gene(s):
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*** [[CHC_T00009438001_1]]
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*** [[CHC_T00009523001_1]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-arabidopsis_thaliana]]
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*** [[orthology-ectocarpus_siliculosus]]
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*** [[orthology-galdieria.sulphuraria]]
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* [[GLUCOKIN-RXN]]
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** 1 associated gene(s):
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*** [[CHC_T00001373001_1]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-ectocarpus_siliculosus]]
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*** [[orthology-galdieria.sulphuraria]]
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* [[PEPDEPHOS-RXN]]
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** 6 associated gene(s):
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*** [[CHC_T00008530001]]
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*** [[CHC_T00008652001]]
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*** [[CHC_T00008652001_1]]
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*** [[CHC_T00008482001_1]]
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*** [[CHC_T00008482001]]
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*** [[CHC_T00008530001_1]]
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** 4 reconstruction source(s) associated:
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*** [[annotation-original_genome]]
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*** [[orthology-arabidopsis_thaliana]]
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*** [[orthology-ectocarpus_siliculosus]]
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*** [[orthology-galdieria.sulphuraria]]
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* [[PGLUCISOM-RXN]]
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** 3 associated gene(s):
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*** [[CHC_T00009370001]]
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*** [[CHC_T00009370001_1]]
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*** [[CHC_T00008268001_1]]
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** 3 reconstruction source(s) associated:
 +
*** [[annotation-original_genome]]
 +
*** [[orthology-ectocarpus_siliculosus]]
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*** [[orthology-galdieria.sulphuraria]]
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* [[PHOSGLYPHOS-RXN]]
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** 3 associated gene(s):
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*** [[CHC_T00004105001_1]]
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*** [[CHC_T00009179001]]
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*** [[CHC_T00009179001_1]]
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** 4 reconstruction source(s) associated:
 +
*** [[annotation-original_genome]]
 +
*** [[orthology-arabidopsis_thaliana]]
 +
*** [[orthology-ectocarpus_siliculosus]]
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*** [[orthology-galdieria.sulphuraria]]
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* [[RIB5PISOM-RXN]]
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** 1 associated gene(s):
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*** [[CHC_T00009264001_1]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-arabidopsis_thaliana]]
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*** [[orthology-ectocarpus_siliculosus]]
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*** [[orthology-galdieria.sulphuraria]]
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* [[RIBULP3EPIM-RXN]]
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** 3 associated gene(s):
 +
*** [[CHC_T00008270001]]
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*** [[CHC_T00008270001_1]]
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*** [[CHC_T00006121001_1]]
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** 4 reconstruction source(s) associated:
 +
*** [[annotation-original_genome]]
 +
*** [[orthology-arabidopsis_thaliana]]
 +
*** [[orthology-ectocarpus_siliculosus]]
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*** [[orthology-galdieria.sulphuraria]]
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* [[TRANSALDOL-RXN]]
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** 1 associated gene(s):
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*** [[CHC_T00000120001_1]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-arabidopsis_thaliana]]
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*** [[orthology-ectocarpus_siliculosus]]
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*** [[orthology-galdieria.sulphuraria]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=ACETATEKIN-RXN ACETATEKIN-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=FRUCTOSE-6-PHOSPHATE-PHOSPHOKETOLASE-RXN FRUCTOSE-6-PHOSPHATE-PHOSPHOKETOLASE-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=L-LACTATE-DEHYDROGENASE-RXN L-LACTATE-DEHYDROGENASE-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHOKETOLASE-RXN PHOSPHOKETOLASE-RXN]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: taxonomic range=TAX-201174}}
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{{#set: in pathway=}}
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{{#set: common name=Bifidobacterium shunt}}
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{{#set: reconstruction category=manual}}
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{{#set: common name=Bifidum fermentation|Bifidum pathway|fructose-6-phosphate pathway|Bifidum shunt|glucose fermentation to lactate (Bifidobacteria)}}
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{{#set: reconstruction source=added to manage seeds from extracellular to cytosol compartment}}
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{{#set: reaction found=11}}
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{{#set: total reaction=15}}
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{{#set: completion rate=73.0}}

Revision as of 16:09, 23 May 2018

Pathway P124-PWY

  • taxonomic range:
  • common name:
    • Bifidobacterium shunt
  • Synonym(s):
    • Bifidum fermentation
    • Bifidum pathway
    • fructose-6-phosphate pathway
    • Bifidum shunt
    • glucose fermentation to lactate (Bifidobacteria)

Reaction(s) found

11 reactions found over 15 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=P124-PWY&oldid=16307"