Difference between revisions of "RXN-13616"

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(Created page with "Category:Gene == Gene CHC_T00010010001 == * left end position: ** 657624 * transcription direction: ** POSITIVE * right end position: ** 661046 * centisome position: ** 72...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13616 RXN-13616] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene CHC_T00010010001 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13616 RXN-13616] ==
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* left end position:
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* direction:
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** 657624
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** LEFT-TO-RIGHT
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* transcription direction:
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* ec number:
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** POSITIVE
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** [http://enzyme.expasy.org/EC/4.2.1.17 EC-4.2.1.17]
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* right end position:
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** 661046
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* centisome position:
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** 72.02426   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[DNA-DIRECTED-RNA-POLYMERASE-RXN]]
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* With identifiers:
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** original_genome
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** 1 [[T2-DECENOYL-COA]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD0-2244]][c]
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***automated-name-match
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* With common name(s):
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== Pathways associated ==
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** 1 trans-dec-2-enoyl-CoA[c] '''+''' 1 H2O[c] '''=>''' 1 (S)-3-hydroxydecanoyl-CoA[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[CHC_T00009422001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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* Gene: [[CHC_T00009349001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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* Gene: [[CHC_T00009190001_1]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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* Gene: [[CHC_T00009110001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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== Pathways ==
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* [[PWY-7094]], fatty acid salvage: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7094 PWY-7094]
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** '''4''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-galdieria.sulphuraria]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=657624}}
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* RHEA:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31193 31193]
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{{#set: right end position=661046}}
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* LIGAND-RXN:
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{{#set: centisome position=72.02426    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R04744 R04744]
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{{#set: reaction associated=DNA-DIRECTED-RNA-POLYMERASE-RXN}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: ec number=EC-4.2.1.17}}
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{{#set: gene associated=CHC_T00009422001_1|CHC_T00009349001_1|CHC_T00009190001_1|CHC_T00009110001_1}}
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{{#set: in pathway=PWY-7094}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-ectocarpus_siliculosus|orthology-galdieria.sulphuraria}}
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{{#set: reconstruction tool=pantograph}}

Revision as of 16:11, 23 May 2018

Reaction RXN-13616

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 trans-dec-2-enoyl-CoA[c] + 1 H2O[c] => 1 (S)-3-hydroxydecanoyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7094, fatty acid salvage: PWY-7094
    • 4 reactions found over 6 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=RXN-13616&oldid=16427"