Difference between revisions of "PWY-7800"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=UDPREDUCT-RXN UDPREDUCT-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ribonucleoside-diph...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7800 PWY-7800] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-27...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=UDPREDUCT-RXN UDPREDUCT-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7800 PWY-7800] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
 
* common name:
 
* common name:
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** ribonucleoside-diphosphate reductase alpha chain
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** Ac/N-end rule pathway
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** ribonucleoside-diphosphate reductase beta chain
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* ec number:
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** [http://enzyme.expasy.org/EC/1.17.4.1 EC-1.17.4.1]
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* Synonym(s):
 
* Synonym(s):
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** N-Terminal acetylation-targeted N-End Rule pathway
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''6''' reactions found over '''21''' reactions in the full pathway
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** 1 [[Red-Thioredoxin]][c] '''+''' 1 [[UDP]][c] '''=>''' 1 [[DUDP]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[Ox-Thioredoxin]][c]
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* [[RXN-17873]]
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* With common name(s):
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** 1 associated gene(s):
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** 1 a reduced thioredoxin[c] '''+''' 1 UDP[c] '''=>''' 1 dUDP[c] '''+''' 1 H2O[c] '''+''' 1 an oxidized thioredoxin[c]
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*** [[CHC_T00008747001]]
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** 1 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[annotation-original_genome]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[RXN-17874]]
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* [[CHC_T00008864001]]
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** 1 associated gene(s):
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** ORIGINAL_GENOME
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*** [[CHC_T00008747001]]
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***AUTOMATED-NAME-MATCH
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** 1 reconstruction source(s) associated:
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* [[CHC_T00008926001]]
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*** [[annotation-original_genome]]
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** ORIGINAL_GENOME
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* [[RXN-17875]]
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***AUTOMATED-NAME-MATCH
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** 1 associated gene(s):
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* [[CHC_T00008864001_1]]
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*** [[CHC_T00008747001]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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** 1 reconstruction source(s) associated:
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** [[pantograph]]-[[a.taliana]]
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*** [[annotation-original_genome]]
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* [[CHC_T00008926001_1]]
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* [[RXN-17876]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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** 1 associated gene(s):
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** [[pantograph]]-[[a.taliana]]
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*** [[CHC_T00008747001]]
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== Pathways  ==
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** 1 reconstruction source(s) associated:
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* [[PWY-7184]], pyrimidine deoxyribonucleotides de novo biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7184 PWY-7184]
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*** [[annotation-original_genome]]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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* [[RXN-17877]]
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* [[PWY-6545]], pyrimidine deoxyribonucleotides de novo biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6545 PWY-6545]
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** 1 associated gene(s):
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** '''8''' reactions found over '''9''' reactions in the full pathway
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*** [[CHC_T00008747001]]
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* [[PWY0-166]], superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli): [http://metacyc.org/META/NEW-IMAGE?object=PWY0-166 PWY0-166]
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** 1 reconstruction source(s) associated:
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** '''12''' reactions found over '''17''' reactions in the full pathway
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*** [[annotation-original_genome]]
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== Reconstruction information  ==
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* [[RXN-17878]]
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* [[orthology]]:
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** 1 associated gene(s):
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** [[pantograph]]:
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*** [[CHC_T00008747001]]
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*** [[galdieria.sulphuraria]]
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** 1 reconstruction source(s) associated:
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*** [[a.taliana]]
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*** [[annotation-original_genome]]
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* [[annotation]]:
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== Reaction(s) not found ==
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** [[pathwaytools]]:
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-17850 RXN-17850]
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*** [[original_genome]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-17851 RXN-17851]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-17852 RXN-17852]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-17853 RXN-17853]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-17854 RXN-17854]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-17855 RXN-17855]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-17856 RXN-17856]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-17857 RXN-17857]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-17858 RXN-17858]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-17859 RXN-17859]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-17860 RXN-17860]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-17861 RXN-17861]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-17862 RXN-17862]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-17863 RXN-17863]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-17864 RXN-17864]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: taxonomic range=TAX-2759}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28026 28026]
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{{#set: common name=Ac/N-end rule pathway}}
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* LIGAND-RXN:
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{{#set: common name=N-Terminal acetylation-targeted N-End Rule pathway}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02018 R02018]
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{{#set: reaction found=6}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: total reaction=21}}
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{{#set: common name=ribonucleoside-diphosphate reductase alpha chain}}
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{{#set: completion rate=29.0}}
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{{#set: common name=ribonucleoside-diphosphate reductase beta chain}}
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{{#set: ec number=EC-1.17.4.1}}
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{{#set: gene associated=CHC_T00008864001|CHC_T00008926001|CHC_T00008864001_1|CHC_T00008926001_1}}
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{{#set: in pathway=PWY-7184|PWY-6545|PWY0-166}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=galdieria.sulphuraria|a.taliana}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=original_genome}}
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Revision as of 17:14, 23 May 2018

Pathway PWY-7800

  • taxonomic range:
  • common name:
    • Ac/N-end rule pathway
  • Synonym(s):
    • N-Terminal acetylation-targeted N-End Rule pathway

Reaction(s) found

6 reactions found over 21 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=PWY-7800&oldid=16586"