Difference between revisions of "RXN-5284"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HEMEOSYN-RXN HEMEOSYN-RXN] == * direction: ** REVERSIBLE * common name: ** heme o biosynthesis * ec...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5284 RXN-5284] == * direction: ** LEFT-TO-RIGHT * common name: ** Magnesium-protoporphyrin IX m...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=HEMEOSYN-RXN HEMEOSYN-RXN] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5284 RXN-5284] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** heme o biosynthesis
+
** Magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase
−
* ec number:
+
−
** [http://enzyme.expasy.org/EC/2.5.1 EC-2.5.1]
+
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[FARNESYL-PP]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[Heme-b]][c] '''<=>''' 1 [[HEME_O]][c] '''+''' 1 [[PPI]][c]
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** 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[131-OXO-MAGNESIUM-PROTOPORPHYRIN-IX-13-M]][c] '''+''' 1 [[NADPH]][c] '''=>''' 2 [[WATER]][c] '''+''' 1 [[DIVINYL-PROTOCHLOROPHYLLIDE-A]][c] '''+''' 1 [[NADP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 (2E,6E)-farnesyl diphosphate[c] '''+''' 1 H2O[c] '''+''' 1 heme b[c] '''<=>''' 1 heme o[c] '''+''' 1 diphosphate[c]
+
** 1 oxygen[c] '''+''' 1 131-oxo-magnesium-protoporphyrin IX 13-monomethyl ester[c] '''+''' 1 NADPH[c] '''=>''' 2 H2O[c] '''+''' 1 3,8-divinyl protochlorophyllide a[c] '''+''' 1 NADP+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[CHC_T00005639001_1]]
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* Gene: [[CHC_670]]
−
** [[pantograph]]-[[galdieria.sulphuraria]]
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** Source: [[annotation-original_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 
== Pathways  ==
 
== Pathways  ==
 +
* [[CHLOROPHYLL-SYN]], 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent): [http://metacyc.org/META/NEW-IMAGE?object=CHLOROPHYLL-SYN CHLOROPHYLL-SYN]
 +
** '''9''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-7159]], 3,8-divinyl-chlorophyllide a biosynthesis III (aerobic, light independent): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7159 PWY-7159]
 +
** '''8''' reactions found over '''9''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[annotation]]
−
** [[pantograph]]:
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** Source: [[annotation-original_genome]]
−
*** [[galdieria.sulphuraria]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28070 28070]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16754 16754]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R07411 R07411]
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** [http://www.genome.jp/dbget-bin/www_bget?R06267 R06267]
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{{#set: direction=REVERSIBLE}}
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{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=heme o biosynthesis}}
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{{#set: common name=Magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase}}
−
{{#set: ec number=EC-2.5.1}}
+
{{#set: gene associated=CHC_670}}
−
{{#set: gene associated=CHC_T00005639001_1}}
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{{#set: in pathway=CHLOROPHYLL-SYN|PWY-7159}}
−
{{#set: in pathway=}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction source=annotation-original_genome}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=galdieria.sulphuraria}}
+

Latest revision as of 16:23, 23 May 2018

Reaction RXN-5284

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • CHLOROPHYLL-SYN, 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent): CHLOROPHYLL-SYN
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-7159, 3,8-divinyl-chlorophyllide a biosynthesis III (aerobic, light independent): PWY-7159
    • 8 reactions found over 9 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=RXN-5284&oldid=16954"