Difference between revisions of "DETHIOBIOTIN-SYN-RXN"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-356 CPD-356] == * smiles: ** C(O)C1(OC(=O)C(O)C(O)1) * inchi key: ** InChIKey=CUOKHACJLGPRH...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DETHIOBIOTIN-SYN-RXN DETHIOBIOTIN-SYN-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http:/...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-356 CPD-356] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DETHIOBIOTIN-SYN-RXN DETHIOBIOTIN-SYN-RXN] ==
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* smiles:
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* direction:
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** C(O)C1(OC(=O)C(O)C(O)1)
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** LEFT-TO-RIGHT
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* inchi key:
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* ec number:
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** InChIKey=CUOKHACJLGPRHD-JJYYJPOSSA-N
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** [http://enzyme.expasy.org/EC/6.3.3.3 EC-6.3.3.3]
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* common name:
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** D-arabinono-1,4-lactone
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* molecular weight:
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** 148.115   
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[1.1.3.37-RXN]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[DIAMINONONANOATE]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''=>''' 3 [[PROTON]][c] '''+''' 1 [[DETHIOBIOTIN]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[Pi]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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** 1 7,8-diaminopelargonate[c] '''+''' 1 ATP[c] '''+''' 1 CO2[c] '''=>''' 3 H+[c] '''+''' 1 dethiobiotin[c] '''+''' 1 ADP[c] '''+''' 1 phosphate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[CHC_T00002287001_1]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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== Pathways  ==
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* [[PWY0-1507]], biotin biosynthesis from 8-amino-7-oxononanoate I: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1507 PWY0-1507]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-7380]], biotin biosynthesis from 8-amino-7-oxononanoate II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7380 PWY-7380]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
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* PUBCHEM:
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* RHEA:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=17723 17723]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15805 15805]
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* CHEMSPIDER:
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* LIGAND-RXN:
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** [http://www.chemspider.com/Chemical-Structure.16751.html 16751]
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** [http://www.genome.jp/dbget-bin/www_bget?R03182 R03182]
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* CHEBI:
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* UNIPROT:
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=16292 16292]
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** [http://www.uniprot.org/uniprot/Q9JV95 Q9JV95]
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* LIGAND-CPD:
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** [http://www.uniprot.org/uniprot/Q9PIJ1 Q9PIJ1]
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** [http://www.genome.jp/dbget-bin/www_bget?C00652 C00652]
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** [http://www.uniprot.org/uniprot/P46397 P46397]
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{{#set: smiles=C(O)C1(OC(=O)C(O)C(O)1)}}
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** [http://www.uniprot.org/uniprot/P22818 P22818]
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{{#set: inchi key=InChIKey=CUOKHACJLGPRHD-JJYYJPOSSA-N}}
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** [http://www.uniprot.org/uniprot/P13000 P13000]
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{{#set: common name=D-arabinono-1,4-lactone}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: molecular weight=148.115    }}
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{{#set: ec number=EC-6.3.3.3}}
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{{#set: consumed by=1.1.3.37-RXN}}
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{{#set: gene associated=CHC_T00002287001_1}}
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{{#set: in pathway=PWY0-1507|PWY-7380}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-ectocarpus_siliculosus}}
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{{#set: reconstruction tool=pantograph}}

Revision as of 16:24, 23 May 2018

Reaction DETHIOBIOTIN-SYN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY0-1507, biotin biosynthesis from 8-amino-7-oxononanoate I: PWY0-1507
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-7380, biotin biosynthesis from 8-amino-7-oxononanoate II: PWY-7380
    • 2 reactions found over 3 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=DETHIOBIOTIN-SYN-RXN&oldid=16996"