Difference between revisions of "CHC T00008759001"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12460 RXN-12460] == * direction: ** LEFT-TO-RIGHT * common name: ** L-asparaginyl-tRNAasn hydro...")
 
(Created page with "Category:Gene == Gene CHC_T00008759001 == * left end position: ** 122323 * transcription direction: ** NEGATIVE * right end position: ** 123081 * centisome position: ** 83...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12460 RXN-12460] ==
+
== Gene CHC_T00008759001 ==
−
* direction:
+
* left end position:
−
** LEFT-TO-RIGHT
+
** 122323
−
* common name:
+
* transcription direction:
−
** L-asparaginyl-tRNAasn hydrolase
+
** NEGATIVE
−
** Peptidyl-tRNA hydrolase 2, mitochondrial
+
* right end position:
−
* ec number:
+
** 123081
−
** [http://enzyme.expasy.org/EC/3.1.1.29 EC-3.1.1.29]
+
* centisome position:
 +
** 83.27921   
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[1.10.2.2-RXN]]
−
** 1 [[Charged-ASN-tRNAs]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[ASN-tRNAs]][c] '''+''' 1 [[ASN]][c]
+
** Source: [[annotation-original_genome]]
−
* With common name(s):
+
*** Assignment: automated-name-match
−
** 1 an L-asparaginyl-[tRNAasn][c] '''+''' 1 H2O[c] '''=>''' 1 H+[c] '''+''' 1 tRNAasn[c] '''+''' 1 L-asparagine[c]
+
* Reaction: [[RXN-14107]]
−
 
+
** Source: [[annotation-original_genome]]
−
== Genes associated with this reaction  ==
+
*** Assignment: automated-name-match
−
Genes have been associated with this reaction based on different elements listed below.
+
* Reaction: [[RXN-15816]]
−
* [[CHC_T00006238001_1]]
+
** Source: [[annotation-original_genome]]
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
*** Assignment: automated-name-match
−
* [[CHC_T00008495001_1]]
+
* Reaction: [[RXN-15829]]
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
** Source: [[annotation-original_genome]]
−
* [[CHC_T00008495001]]
+
*** Assignment: automated-name-match
−
** ORIGINAL_GENOME
+
== Pathways associated ==
−
***AUTOMATED-NAME-MATCH
+
* [[PWY-7082]]
−
== Pathways  ==
+
* [[PWY-6692]]
−
* [[PWY490-4]], L-asparagine biosynthesis III (tRNA-dependent): [http://metacyc.org/META/NEW-IMAGE?object=PWY490-4 PWY490-4]
+
* [[PWY-3781]]
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
* [[PWY-7279]]
−
== Reconstruction information  ==
+
−
* [[orthology]]:
+
−
** [[pantograph]]:
+
−
*** [[galdieria.sulphuraria]]
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[original_genome]]
+
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: left end position=122323}}
−
{{#set: common name=L-asparaginyl-tRNAasn hydrolase}}
+
{{#set: transcription direction=NEGATIVE}}
−
{{#set: common name=Peptidyl-tRNA hydrolase 2, mitochondrial}}
+
{{#set: right end position=123081}}
−
{{#set: ec number=EC-3.1.1.29}}
+
{{#set: centisome position=83.27921    }}
−
{{#set: gene associated=CHC_T00006238001_1|CHC_T00008495001_1|CHC_T00008495001}}
+
{{#set: reaction associated=1.10.2.2-RXN|RXN-14107|RXN-15816|RXN-15829}}
−
{{#set: in pathway=PWY490-4}}
+
{{#set: pathway associated=PWY-7082|PWY-6692|PWY-3781|PWY-7279}}
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=galdieria.sulphuraria}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=original_genome}}
+

Revision as of 16:24, 23 May 2018

Gene CHC_T00008759001

  • left end position:
    • 122323
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 123081
  • centisome position:
    • 83.27921
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=CHC_T00008759001&oldid=17018"