Difference between revisions of "D-SERINE"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9673 RXN-9673] == * direction: ** LEFT-TO-RIGHT * common name: ** long-chain-fatty-acid-CoA lig...")
 
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=D-SERINE D-SERINE] == * smiles: ** C(O)C([N+])C([O-])=O * inchi key: ** InChIKey=MTCFGRXMJLQNBG...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9673 RXN-9673] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=D-SERINE D-SERINE] ==
* direction:
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* smiles:
** LEFT-TO-RIGHT
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** C(O)C([N+])C([O-])=O
 +
* inchi key:
 +
** InChIKey=MTCFGRXMJLQNBG-UWTATZPHSA-N
 
* common name:
 
* common name:
** long-chain-fatty-acid-CoA ligase
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** D-serine
* ec number:
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* molecular weight:
** [http://enzyme.expasy.org/EC/6.2.1.3 EC-6.2.1.3]
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** 105.093   
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
* With identifiers:
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== Reaction(s) known to produce the compound ==
** 1 [[CO-A]][c] '''+''' 1 [[LINOLEIC_ACID]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[CPD-18]][c] '''+''' 1 [[AMP]][c]
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* [[5.1.1.18-RXN]]
* With common name(s):
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== Reaction(s) of unknown directionality ==
** 1 coenzyme A[c] '''+''' 1 linoleate[c] '''+''' 1 ATP[c] '''=>''' 1 diphosphate[c] '''+''' 1 linoleoyl-CoA[c] '''+''' 1 AMP[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[CHC_T00008160001_1]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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* [[CHC_T00009428001_1]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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* [[CHC_T00008811001_1]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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* [[CHC_T00009428001]]
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** ORIGINAL_GENOME
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***AUTOMATED-NAME-MATCH
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* [[CHC_T00008811001]]
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** ORIGINAL_GENOME
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***AUTOMATED-NAME-MATCH
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* [[CHC_T00008500001_1]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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== Pathways  ==
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* [[PWY-6000]], γ-linolenate biosynthesis II (animals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6000 PWY-6000]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[galdieria.sulphuraria]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[original_genome]]
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== External links  ==
 
== External links  ==
* RHEA:
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* CAS : 312-84-5
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=33652 33652]
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* METABOLIGHTS : MTBLC35247
{{#set: direction=LEFT-TO-RIGHT}}
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* PUBCHEM:
{{#set: common name=long-chain-fatty-acid-CoA ligase}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=6857549 6857549]
{{#set: ec number=EC-6.2.1.3}}
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* HMDB : HMDB03406
{{#set: gene associated=CHC_T00008160001_1|CHC_T00009428001_1|CHC_T00008811001_1|CHC_T00009428001|CHC_T00008811001|CHC_T00008500001_1}}
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* LIGAND-CPD:
{{#set: in pathway=PWY-6000}}
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** [http://www.genome.jp/dbget-bin/www_bget?C00740 C00740]
{{#set: reconstruction category=orthology}}
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* CHEBI:
{{#set: reconstruction tool=pantograph}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=35247 35247]
{{#set: reconstruction source=galdieria.sulphuraria}}
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* BIGG : ser__D
{{#set: reconstruction category=annotation}}
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{{#set: smiles=C(O)C([N+])C([O-])=O}}
{{#set: reconstruction tool=pathwaytools}}
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{{#set: inchi key=InChIKey=MTCFGRXMJLQNBG-UWTATZPHSA-N}}
{{#set: reconstruction source=original_genome}}
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{{#set: common name=D-serine}}
 +
{{#set: molecular weight=105.093    }}
 +
{{#set: produced by=5.1.1.18-RXN}}

Revision as of 16:25, 23 May 2018

Metabolite D-SERINE

  • smiles:
    • C(O)C([N+])C([O-])=O
  • inchi key:
    • InChIKey=MTCFGRXMJLQNBG-UWTATZPHSA-N
  • common name:
    • D-serine
  • molecular weight:
    • 105.093
  • Synonym(s):

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • CAS : 312-84-5
  • METABOLIGHTS : MTBLC35247
  • PUBCHEM:
  • HMDB : HMDB03406
  • LIGAND-CPD:
  • CHEBI:
  • BIGG : ser__D
"C(O)C([N+])C([O-])=O" cannot be used as a page name in this wiki.