|
|
Line 1: |
Line 1: |
− | [[Category:Reaction]] | + | [[Category:Gene]] |
− | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PHENYLALANINE--TRNA-LIGASE-RXN PHENYLALANINE--TRNA-LIGASE-RXN] == | + | == Gene CHC_T00010127001 == |
− | * direction: | + | * left end position: |
− | ** LEFT-TO-RIGHT | + | ** 334465 |
− | * common name: | + | * transcription direction: |
− | ** phenylalanyl-tRNA synthetase alpha chain | + | ** POSITIVE |
− | ** phenylalanine tRNA synthetase | + | * right end position: |
− | * ec number: | + | ** 334962 |
− | ** [http://enzyme.expasy.org/EC/6.1.1.20 EC-6.1.1.20] | + | * centisome position: |
| + | ** 87.72576 |
| * Synonym(s): | | * Synonym(s): |
| | | |
− | == Reaction Formula == | + | == Reactions associated == |
− | * With identifiers: | + | * Reaction: [[DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN]] |
− | ** 1 [[ATP]][c] '''+''' 1 [[PHE-tRNAs]][c] '''+''' 1 [[PHE]][c] '''=>''' 1 [[Charged-PHE-tRNAs]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[AMP]][c]
| + | ** Source: [[annotation-original_genome]] |
− | * With common name(s): | + | *** Assignment: automated-name-match |
− | ** 1 ATP[c] '''+''' 1 a tRNAphe[c] '''+''' 1 L-phenylalanine[c] '''=>''' 1 an L-phenylalanyl-[tRNAphe][c] '''+''' 1 diphosphate[c] '''+''' 1 AMP[c]
| + | == Pathways associated == |
− | | + | * [[TRIGLSYN-PWY]] |
− | == Genes associated with this reaction ==
| + | |
− | Genes have been associated with this reaction based on different elements listed below.
| + | |
− | * [[CHC_T00009560001_1]] | + | |
− | ** [[pantograph]]-[[galdieria.sulphuraria]] | + | |
− | * [[CHC_T00002604001_1]]
| + | |
− | ** [[pantograph]]-[[galdieria.sulphuraria]]
| + | |
− | * [[CHC_T00003422001_1]]
| + | |
− | ** [[pantograph]]-[[galdieria.sulphuraria]]
| + | |
− | * [[CHC_270]]
| + | |
− | ** ORIGINAL_GENOME
| + | |
− | ***AUTOMATED-NAME-MATCH
| + | |
− | * [[CHC_T00009560001]]
| + | |
− | ** ORIGINAL_GENOME
| + | |
− | ***AUTOMATED-NAME-MATCH
| + | |
− | == Pathways == | + | |
− | * [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY] | + | |
− | ** '''21''' reactions found over '''21''' reactions in the full pathway
| + | |
− | == Reconstruction information ==
| + | |
− | * [[orthology]]:
| + | |
− | ** [[pantograph]]:
| + | |
− | *** [[galdieria.sulphuraria]]
| + | |
− | * [[annotation]]:
| + | |
− | ** [[pathwaytools]]:
| + | |
− | *** [[original_genome]]
| + | |
| == External links == | | == External links == |
− | * RHEA:
| + | {{#set: left end position=334465}} |
− | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19413 19413]
| + | {{#set: transcription direction=POSITIVE}} |
− | * LIGAND-RXN:
| + | {{#set: right end position=334962}} |
− | ** [http://www.genome.jp/dbget-bin/www_bget?R03660 R03660]
| + | {{#set: centisome position=87.72576 }} |
− | * UNIPROT:
| + | {{#set: reaction associated=DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN}} |
− | ** [http://www.uniprot.org/uniprot/P94283 P94283]
| + | {{#set: pathway associated=TRIGLSYN-PWY}} |
− | ** [http://www.uniprot.org/uniprot/Q9ZDB4 Q9ZDB4]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q9WZS9 Q9WZS9]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q9PP34 Q9PP34]
| + | |
− | ** [http://www.uniprot.org/uniprot/P56145 P56145]
| + | |
− | ** [http://www.uniprot.org/uniprot/O67620 O67620]
| + | |
− | ** [http://www.uniprot.org/uniprot/O73984 O73984]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q9Z6R6 Q9Z6R6]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q58508 Q58508]
| + | |
− | ** [http://www.uniprot.org/uniprot/P56146 P56146]
| + | |
− | ** [http://www.uniprot.org/uniprot/O27545 O27545]
| + | |
− | ** [http://www.uniprot.org/uniprot/O26837 O26837]
| + | |
− | ** [http://www.uniprot.org/uniprot/O58391 O58391]
| + | |
− | ** [http://www.uniprot.org/uniprot/O83938 O83938]
| + | |
− | ** [http://www.uniprot.org/uniprot/P47436 P47436]
| + | |
− | ** [http://www.uniprot.org/uniprot/O67087 O67087]
| + | |
− | ** [http://www.uniprot.org/uniprot/O83059 O83059]
| + | |
− | ** [http://www.uniprot.org/uniprot/O84843 O84843]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q9UYX3 Q9UYX3]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q9Z7W0 Q9Z7W0]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q9PJR8 Q9PJR8]
| + | |
− | ** [http://www.uniprot.org/uniprot/P47437 P47437]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q9ZKF9 Q9ZKF9]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q9UYX2 Q9UYX2]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q9ZKF8 Q9ZKF8]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q9JR76 Q9JR76]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q57911 Q57911]
| + | |
− | ** [http://www.uniprot.org/uniprot/P43819 P43819]
| + | |
− | ** [http://www.uniprot.org/uniprot/P94282 P94282]
| + | |
− | ** [http://www.uniprot.org/uniprot/O84481 O84481]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q9ZDB5 Q9ZDB5]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q9WZS8 Q9WZS8]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q9RRX8 Q9RRX8]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q9PP35 Q9PP35]
| + | |
− | ** [http://www.uniprot.org/uniprot/P43820 P43820]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q46107 Q46107]
| + | |
− | ** [http://www.uniprot.org/uniprot/P15434 P15434]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q5SGX1 Q5SGX1]
| + | |
− | ** [http://www.uniprot.org/uniprot/P37984 P37984]
| + | |
− | ** [http://www.uniprot.org/uniprot/P51346 P51346]
| + | |
− | ** [http://www.uniprot.org/uniprot/P75563 P75563]
| + | |
− | ** [http://www.uniprot.org/uniprot/P75564 P75564]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q55187 Q55187]
| + | |
− | ** [http://www.uniprot.org/uniprot/P95960 P95960]
| + | |
− | ** [http://www.uniprot.org/uniprot/P95961 P95961]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q49032 Q49032]
| + | |
− | ** [http://www.uniprot.org/uniprot/P08312 P08312]
| + | |
− | ** [http://www.uniprot.org/uniprot/P07395 P07395]
| + | |
− | ** [http://www.uniprot.org/uniprot/O42870 O42870]
| + | |
− | ** [http://www.uniprot.org/uniprot/O13432 O13432]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q9GYS8 Q9GYS8]
| + | |
− | ** [http://www.uniprot.org/uniprot/O42849 O42849]
| + | |
− | ** [http://www.uniprot.org/uniprot/P17921 P17921]
| + | |
− | ** [http://www.uniprot.org/uniprot/P17922 P17922]
| + | |
− | ** [http://www.uniprot.org/uniprot/P15625 P15625]
| + | |
− | ** [http://www.uniprot.org/uniprot/P08425 P08425]
| + | |
− | ** [http://www.uniprot.org/uniprot/P15624 P15624]
| + | |
− | {{#set: direction=LEFT-TO-RIGHT}} | + | |
− | {{#set: common name=phenylalanyl-tRNA synthetase alpha chain}} | + | |
− | {{#set: common name=phenylalanine tRNA synthetase}} | + | |
− | {{#set: ec number=EC-6.1.1.20}} | + | |
− | {{#set: gene associated=CHC_T00009560001_1|CHC_T00002604001_1|CHC_T00003422001_1|CHC_270|CHC_T00009560001}} | + | |
− | {{#set: in pathway=TRNA-CHARGING-PWY}} | + | |
− | {{#set: reconstruction category=orthology}}
| + | |
− | {{#set: reconstruction tool=pantograph}}
| + | |
− | {{#set: reconstruction source=galdieria.sulphuraria}}
| + | |
− | {{#set: reconstruction category=annotation}}
| + | |
− | {{#set: reconstruction tool=pathwaytools}}
| + | |
− | {{#set: reconstruction source=original_genome}}
| + | |