Difference between revisions of "LUMAZINESYN-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-35 CPD-35] == * smiles: ** CC(=O)NCCCC(=O)[O-] * inchi key: ** InChIKey=UZTFMUBKZQVKLK-UHFF...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=LUMAZINESYN-RXN LUMAZINESYN-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.ex...")
Line 1: Line 1:
−
[[Category:Metabolite]]
+
[[Category:Reaction]]
−
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-35 CPD-35] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=LUMAZINESYN-RXN LUMAZINESYN-RXN] ==
−
* smiles:
+
* direction:
−
** CC(=O)NCCCC(=O)[O-]
+
** LEFT-TO-RIGHT
−
* inchi key:
+
* ec number:
−
** InChIKey=UZTFMUBKZQVKLK-UHFFFAOYSA-M
+
** [http://enzyme.expasy.org/EC/2.5.1.78 EC-2.5.1.78]
−
* common name:
+
−
** 4-acetamidobutanoate
+
−
* molecular weight:
+
−
** 144.15   
+
 
* Synonym(s):
 
* Synonym(s):
−
** N-acetyl-4-aminobutyrate
 
−
** N-acetyl-γ-aminobutyrate
 
  
−
== Reaction(s) known to consume the compound ==
+
== Reaction Formula ==
−
== Reaction(s) known to produce the compound ==
+
* With identifiers:
−
* [[RXN-37]]
+
** 1 [[DIHYDROXY-BUTANONE-P]][c] '''+''' 1 [[AMINO-RIBOSYLAMINO-1H-3H-PYR-DIONE]][c] '''=>''' 1 [[DIMETHYL-D-RIBITYL-LUMAZINE]][c] '''+''' 2 [[WATER]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c]
−
== Reaction(s) of unknown directionality ==
+
* With common name(s):
 +
** 1 1-deoxy-L-glycero-tetrulose 4-phosphate[c] '''+''' 1 5-amino-6-(D-ribitylamino)uracil[c] '''=>''' 1 6,7-dimethyl-8-(1-D-ribityl)lumazine[c] '''+''' 2 H2O[c] '''+''' 1 H+[c] '''+''' 1 phosphate[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[CHC_T00007345001_1]]
 +
** Source: [[orthology-galdieria.sulphuraria]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
== Pathways  ==
 +
* [[PWY-6167]], flavin biosynthesis II (archaea): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6167 PWY-6167]
 +
** '''4''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-6168]], flavin biosynthesis III (fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6168 PWY-6168]
 +
** '''6''' reactions found over '''9''' reactions in the full pathway
 +
* [[RIBOSYN2-PWY]], flavin biosynthesis I (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=RIBOSYN2-PWY RIBOSYN2-PWY]
 +
** '''8''' reactions found over '''9''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-galdieria.sulphuraria]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
* PUBCHEM:
+
* RHEA:
−
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=6991994 6991994]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=26152 26152]
−
* HMDB : HMDB03681
+
* LIGAND-RXN:
−
* LIGAND-CPD:
+
** [http://www.genome.jp/dbget-bin/www_bget?R04457 R04457]
−
** [http://www.genome.jp/dbget-bin/www_bget?C02946 C02946]
+
{{#set: direction=LEFT-TO-RIGHT}}
−
* CHEMSPIDER:
+
{{#set: ec number=EC-2.5.1.78}}
−
** [http://www.chemspider.com/Chemical-Structure.5360158.html 5360158]
+
{{#set: gene associated=CHC_T00007345001_1}}
−
* CHEBI:
+
{{#set: in pathway=PWY-6167|PWY-6168|RIBOSYN2-PWY}}
−
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=11951 11951]
+
{{#set: reconstruction category=orthology}}
−
* METABOLIGHTS : MTBLC11951
+
{{#set: reconstruction source=orthology-ectocarpus_siliculosus|orthology-galdieria.sulphuraria}}
−
{{#set: smiles=CC(=O)NCCCC(=O)[O-]}}
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: inchi key=InChIKey=UZTFMUBKZQVKLK-UHFFFAOYSA-M}}
+
−
{{#set: common name=4-acetamidobutanoate}}
+
−
{{#set: molecular weight=144.15    }}
+
−
{{#set: common name=N-acetyl-4-aminobutyrate|N-acetyl-γ-aminobutyrate}}
+
−
{{#set: produced by=RXN-37}}
+

Revision as of 16:29, 23 May 2018

Reaction LUMAZINESYN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6167, flavin biosynthesis II (archaea): PWY-6167
    • 4 reactions found over 10 reactions in the full pathway
  • PWY-6168, flavin biosynthesis III (fungi): PWY-6168
    • 6 reactions found over 9 reactions in the full pathway
  • RIBOSYN2-PWY, flavin biosynthesis I (bacteria and plants): RIBOSYN2-PWY
    • 8 reactions found over 9 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=LUMAZINESYN-RXN&oldid=17233"