Difference between revisions of "CHC T00008653001"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TREHALOSEPHOSPHA-RXN TREHALOSEPHOSPHA-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Treha...")
 
(Created page with "Category:Gene == Gene CHC_T00008653001 == * left end position: ** 264715 * transcription direction: ** NEGATIVE * right end position: ** 265995 * centisome position: ** 40...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=TREHALOSEPHOSPHA-RXN TREHALOSEPHOSPHA-RXN] ==
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== Gene CHC_T00008653001 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 264715
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* common name:
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* transcription direction:
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** Trehalose 6-phosphate synthase, family GT20 / Trehalose 6-phosphate phosphatase
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** NEGATIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/3.1.3.12 EC-3.1.3.12]
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** 265995
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* centisome position:
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** 40.518803   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[CHORISMATE-SYNTHASE-RXN]]
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** 1 [[TREHALOSE-6P]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[TREHALOSE]][c]
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** Source: [[annotation-original_genome]]
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* With common name(s):
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*** Assignment: automated-name-match
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** 1 α,α-trehalose 6-phosphate[c] '''+''' 1 H2O[c] '''=>''' 1 phosphate[c] '''+''' 1 α,α-trehalose[c]
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== Pathways associated ==
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* [[PWY-6163]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[CHC_T00002090001_1]]
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** [[pantograph]]-[[a.taliana]]
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* [[CHC_T00010201001]]
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** ORIGINAL_GENOME
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***AUTOMATED-NAME-MATCH
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* [[CHC_T00010201001_1]]
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** [[pantograph]]-[[a.taliana]]
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* [[CHC_T00009495001]]
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** ORIGINAL_GENOME
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***AUTOMATED-NAME-MATCH
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* [[CHC_T00008273001]]
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** ORIGINAL_GENOME
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***AUTOMATED-NAME-MATCH
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== Pathways ==
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* [[TRESYN-PWY]], trehalose biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=TRESYN-PWY TRESYN-PWY]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-881]], trehalose biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-881 PWY-881]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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* [[TREHALOSESYN-PWY]], trehalose biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=TREHALOSESYN-PWY TREHALOSESYN-PWY]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[a.taliana]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[original_genome]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=264715}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23420 23420]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: right end position=265995}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02778 R02778]
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{{#set: centisome position=40.518803    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R06228 R06228]
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{{#set: reaction associated=CHORISMATE-SYNTHASE-RXN}}
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* UNIPROT:
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{{#set: pathway associated=PWY-6163}}
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** [http://www.uniprot.org/uniprot/P31678 P31678]
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** [http://www.uniprot.org/uniprot/P31688 P31688]
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** [http://www.uniprot.org/uniprot/Q00786 Q00786]
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** [http://www.uniprot.org/uniprot/P78875 P78875]
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** [http://www.uniprot.org/uniprot/O64896 O64896]
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** [http://www.uniprot.org/uniprot/O64897 O64897]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Trehalose 6-phosphate synthase, family GT20 / Trehalose 6-phosphate phosphatase}}
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{{#set: ec number=EC-3.1.3.12}}
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{{#set: gene associated=CHC_T00002090001_1|CHC_T00010201001|CHC_T00010201001_1|CHC_T00009495001|CHC_T00008273001}}
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{{#set: in pathway=TRESYN-PWY|PWY-881|TREHALOSESYN-PWY}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=a.taliana}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=original_genome}}
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Latest revision as of 16:29, 23 May 2018

Gene CHC_T00008653001

  • left end position:
    • 264715
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 265995
  • centisome position:
    • 40.518803
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=CHC_T00008653001&oldid=17249"