Difference between revisions of "TREHALOSEPHOSPHA-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Gene == Gene CHC_T00009444001 == * left end position: ** 557085 * transcription direction: ** POSITIVE * right end position: ** 557810 * centisome position: ** 98...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TREHALOSEPHOSPHA-RXN TREHALOSEPHOSPHA-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Treha...")
Line 1: Line 1:
−
[[Category:Gene]]
+
[[Category:Reaction]]
−
== Gene CHC_T00009444001 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=TREHALOSEPHOSPHA-RXN TREHALOSEPHOSPHA-RXN] ==
−
* left end position:
+
* direction:
−
** 557085
+
** LEFT-TO-RIGHT
−
* transcription direction:
+
* common name:
−
** POSITIVE
+
** Trehalose 6-phosphate synthase, family GT20 / Trehalose 6-phosphate phosphatase
−
* right end position:
+
* ec number:
−
** 557810
+
** [http://enzyme.expasy.org/EC/3.1.3.12 EC-3.1.3.12]
−
* centisome position:
+
−
** 98.47641   
+
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reactions associated ==
+
== Reaction Formula ==
−
* [[GSHTRAN-RXN]]
+
* With identifiers:
−
** original_genome
+
** 1 [[WATER]][c] '''+''' 1 [[TREHALOSE-6P]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[TREHALOSE]][c]
−
***automated-name-match
+
* With common name(s):
−
* [[GST-RXN]]
+
** 1 H2O[c] '''+''' 1 α,α-trehalose 6-phosphate[c] '''=>''' 1 phosphate[c] '''+''' 1 α,α-trehalose[c]
−
** original_genome
+
 
−
***automated-name-match
+
== Genes associated with this reaction  ==
−
* [[RXN-13673]]
+
Genes have been associated with this reaction based on different elements listed below.
−
** original_genome
+
* Gene: [[CHC_T00008273001]]
−
***automated-name-match
+
** Source: [[annotation-original_genome]]
−
* [[RXN-15680]]
+
*** Assignment: AUTOMATED-NAME-MATCH
−
** original_genome
+
* Gene: [[CHC_T00009495001]]
−
***automated-name-match
+
** Source: [[annotation-original_genome]]
−
== Pathways associated ==
+
*** Assignment: AUTOMATED-NAME-MATCH
−
* [[PWY-7112]]
+
* Gene: [[CHC_T00009495001_1]]
−
* [[PWY-6842]]
+
** Source: [[orthology-ectocarpus_siliculosus]]
−
* [[PWY-4061]]
+
* Gene: [[CHC_T00010201001]]
−
* [[PWY-7533]]
+
** Source: [[annotation-original_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[CHC_T00010201001_1]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
** Source: [[orthology-arabidopsis_thaliana]]
 +
* Gene: [[CHC_T00002090001_1]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
** Source: [[orthology-arabidopsis_thaliana]]
 +
== Pathways ==
 +
* [[TREHALOSESYN-PWY]], trehalose biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=TREHALOSESYN-PWY TREHALOSESYN-PWY]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-881]], trehalose biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-881 PWY-881]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[TRESYN-PWY]], trehalose biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=TRESYN-PWY TRESYN-PWY]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-arabidopsis_thaliana]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-original_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: left end position=557085}}
+
* RHEA:
−
{{#set: transcription direction=POSITIVE}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23420 23420]
−
{{#set: right end position=557810}}
+
* LIGAND-RXN:
−
{{#set: centisome position=98.47641    }}
+
** [http://www.genome.jp/dbget-bin/www_bget?R02778 R02778]
−
{{#set: reaction associated=GSHTRAN-RXN|GST-RXN|RXN-13673|RXN-15680}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R06228 R06228]
−
{{#set: pathway associated=PWY-7112|PWY-6842|PWY-4061|PWY-7533}}
+
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P31678 P31678]
 +
** [http://www.uniprot.org/uniprot/P31688 P31688]
 +
** [http://www.uniprot.org/uniprot/Q00786 Q00786]
 +
** [http://www.uniprot.org/uniprot/P78875 P78875]
 +
** [http://www.uniprot.org/uniprot/O64896 O64896]
 +
** [http://www.uniprot.org/uniprot/O64897 O64897]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=Trehalose 6-phosphate synthase, family GT20 / Trehalose 6-phosphate phosphatase}}
 +
{{#set: ec number=EC-3.1.3.12}}
 +
{{#set: gene associated=CHC_T00008273001|CHC_T00009495001|CHC_T00009495001_1|CHC_T00010201001|CHC_T00010201001_1|CHC_T00002090001_1}}
 +
{{#set: in pathway=TREHALOSESYN-PWY|PWY-881|TRESYN-PWY}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-original_genome|orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 17:32, 23 May 2018

Reaction TREHALOSEPHOSPHA-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Trehalose 6-phosphate synthase, family GT20 / Trehalose 6-phosphate phosphatase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H2O[c] + 1 α,α-trehalose 6-phosphate[c] => 1 phosphate[c] + 1 α,α-trehalose[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=TREHALOSEPHOSPHA-RXN&oldid=17390"