Difference between revisions of "3.5.1.27-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=KDOTRANS-RXN KDOTRANS-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.o...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.5.1.27-RXN 3.5.1.27-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.o...")
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=KDOTRANS-RXN KDOTRANS-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.5.1.27-RXN 3.5.1.27-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.4.99.12 EC-2.4.99.12]
+
** [http://enzyme.expasy.org/EC/3.5.1.88 EC-3.5.1.88]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CMP-KDO]][c] '''+''' 1 [[LIPID-IV-A]][c] '''=>''' 1 [[CMP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[KDO-LIPID-IVA]][c]
+
** 1 [[WATER]][c] '''+''' 1 [[Charged-fMET-tRNAs]][c] '''=>''' 1 [[L-Methionylaminoacyl-tRNAs]][c] '''+''' 1 [[FORMATE]][c] '''+''' 1 [[PROTON]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 CMP-3-deoxy-β-D-manno-octulosonate[c] '''+''' 1 lipid IVA[c] '''=>''' 1 CMP[c] '''+''' 1 H+[c] '''+''' 1 α-Kdo-(2→6)-lipid IVA[c]
+
** 1 H2O[c] '''+''' 1 an N-formyl-L-methionylaminoacyl-tRNA[c] '''=>''' 1 a L-methionylaminoacyl-tRNA[c] '''+''' 1 formate[c] '''+''' 1 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[CHC_T00003262001_1]]
+
* Gene: [[CHC_T00007478001_1]]
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
** Source: [[orthology-galdieria.sulphuraria]]
−
** [[pantograph]]-[[a.taliana]]
+
** Source: [[orthology-ectocarpus_siliculosus]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[KDOSYN-PWY]], Kdo transfer to lipid IVA I: [http://metacyc.org/META/NEW-IMAGE?object=KDOSYN-PWY KDOSYN-PWY]
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-7675]], Kdo transfer to lipid IVA II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7675 PWY-7675]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-ectocarpus_siliculosus]]
−
*** [[galdieria.sulphuraria]]
+
*** Tool: [[pantograph]]
−
*** [[a.taliana]]
+
** Source: [[orthology-galdieria.sulphuraria]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28066 28066]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R04658 R04658]
+
** [http://www.genome.jp/dbget-bin/www_bget?R04268 R04268]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P44786 P44786]
 +
** [http://www.uniprot.org/uniprot/P0A6K3 P0A6K3]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-2.4.99.12}}
+
{{#set: ec number=EC-3.5.1.88}}
−
{{#set: gene associated=CHC_T00003262001_1}}
+
{{#set: gene associated=CHC_T00007478001_1}}
−
{{#set: in pathway=KDOSYN-PWY|PWY-7675}}
+
{{#set: in pathway=}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-ectocarpus_siliculosus|orthology-galdieria.sulphuraria}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=galdieria.sulphuraria|a.taliana}}
 

Revision as of 16:36, 23 May 2018

Reaction 3.5.1.27-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=3.5.1.27-RXN&oldid=17591"