Difference between revisions of "CHC T00009559001"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14014 RXN-14014] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
(Created page with "Category:Gene == Gene CHC_T00009559001 == * left end position: ** 205024 * transcription direction: ** POSITIVE * right end position: ** 206034 * centisome position: ** 51...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14014 RXN-14014] ==
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== Gene CHC_T00009559001 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 205024
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/1.17.1.8 EC-1.17.1.8]
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** POSITIVE
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* right end position:
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** 206034
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* centisome position:
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** 51.47283   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[GLYCERATE-DEHYDROGENASE-RXN]]
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** 1 [[PROTON]][c] '''+''' 1 [[CPD-14443]][c] '''+''' 1 [[NADPH]][c] '''=>''' 1 [[DELTA1-PIPERIDEINE-2-6-DICARBOXYLATE]][c] '''+''' 1 [[NADP]][c] '''+''' 1 [[WATER]][c]
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** Source: [[annotation-original_genome]]
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* With common name(s):
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*** Assignment: automated-name-match
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** 1 H+[c] '''+''' 1 (2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate[c] '''+''' 1 NADPH[c] '''=>''' 1 (S)-2,3,4,5-tetrahydrodipicolinate[c] '''+''' 1 NADP+[c] '''+''' 1 H2O[c]
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* Reaction: [[HYDROXYPYRUVATE-REDUCTASE-RXN]]
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** Source: [[annotation-original_genome]]
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== Genes associated with this reaction  ==
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*** Assignment: automated-name-match
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[RXN0-300]]
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* [[CHC_T00003353001_1]]
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** Source: [[annotation-original_genome]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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*** Assignment: automated-name-match
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== Pathways  ==
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== Pathways associated ==
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* [[PWY-5097]], L-lysine biosynthesis VI: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5097 PWY-5097]
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* [[PWY-1622]]
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** '''7''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-181]]
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* [[PWY-2942]], L-lysine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2942 PWY-2942]
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** '''5''' reactions found over '''7''' reactions in the full pathway
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* [[DAPLYSINESYN-PWY]], L-lysine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=DAPLYSINESYN-PWY DAPLYSINESYN-PWY]
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** '''6''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-2941]], L-lysine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2941 PWY-2941]
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** '''6''' reactions found over '''9''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[galdieria.sulphuraria]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: left end position=205024}}
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** [http://www.genome.jp/dbget-bin/www_bget?R04199 R04199]
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{{#set: transcription direction=POSITIVE}}
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** [http://www.genome.jp/dbget-bin/www_bget?R04198 R04198]
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{{#set: right end position=206034}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: centisome position=51.47283    }}
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{{#set: ec number=EC-1.17.1.8}}
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{{#set: reaction associated=GLYCERATE-DEHYDROGENASE-RXN|HYDROXYPYRUVATE-REDUCTASE-RXN|RXN0-300}}
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{{#set: gene associated=CHC_T00003353001_1}}
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{{#set: pathway associated=PWY-1622|PWY-181}}
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{{#set: in pathway=PWY-5097|PWY-2942|DAPLYSINESYN-PWY|PWY-2941}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=galdieria.sulphuraria}}
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Revision as of 16:40, 23 May 2018

Gene CHC_T00009559001

  • left end position:
    • 205024
  • transcription direction:
    • POSITIVE
  • right end position:
    • 206034
  • centisome position:
    • 51.47283
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=CHC_T00009559001&oldid=17793"