Difference between revisions of "CHC T00009146001"

Revision as of 11:44, 31 January 2018

	Common name	Reaction found	Reaction not found	Completion rate
1CMET2-PWY	N10-formyl-tetrahydrofolate biosynthesis N10-formyl-THF biosynthesis	7		78.0
2PHENDEG-PWY	Phenylethylamine degradation I	1	2	50.0
3-HYDROXYPHENYLACETATE-DEGRADATION-PWY	4-hydroxyphenylacetate degradation 4-HPA degradation Homoprotocatechuate degradation	2		25.0
ACETOACETATE-DEG-PWY	Acetoacetate degradation (to acetyl CoA)	1		50.0
ADENOSYLHOMOCYSCAT-PWY	L-methionine salvage from L-homocysteine	1		33.0
ALACAT2-PWY	L-alanine degradation II (to D-lactate)	2		67.0
ALANINE-VALINESYN-PWY	L-alanine biosynthesis I	1		33.0
ANAGLYCOLYSIS-PWY	Glycolysis III (from glucose) Anaerobic glycolysis Embden-Meyerhof-Parnas pathway EMP pathway Glycolysis III (glucokinase)	10		100.0
ANAPHENOXI-PWY	L-phenylalanine degradation II (anaerobic) Anaerobic L-phenylalanine oxidation	1		33.0
ARG-GLU-PWY	L-arginine degradation VII (arginase 3 pathway)	1		50.0
ARG-PRO-PWY	L-arginine degradation VI (arginase 2 pathway) L-proline biosynthesis from arginine	3		75.0
ARGASEDEG-PWY	L-arginine degradation I (arginase pathway) L-arginase degradative pathway L-glutamate biosynthesis	1		33.0
ARGDEG-III-PWY	L-arginine degradation IV (arginine decarboxylase/agmatine deiminase pathway)	1		33.0
ARGDEG-IV-PWY	L-arginine degradation VIII (arginine oxidase pathway)	1		25.0
ARGDEG-V-PWY	L-arginine degradation X (arginine monooxygenase pathway)	3		100.0
ARGDEGRAD-PWY	L-arginine degradation V (arginine deiminase pathway) L-arginine dihydrolase pathway L-arginine deiminase degradation	2		67.0
ARGININE-SYN4-PWY	L-ornithine biosynthesis II	4		100.0
ARGSPECAT-PWY	Spermine biosynthesis	2		100.0
ARGSYN-PWY	L-arginine biosynthesis I (via L-ornithine)	5		83.0
ARGSYNBSUB-PWY	L-arginine biosynthesis II (acetyl cycle)	9		100.0
ASPARAGINE-BIOSYNTHESIS	L-asparagine biosynthesis I	1		100.0
ASPARAGINE-DEG1-PWY	L-asparagine degradation I	1		100.0
ASPARAGINE-DEG1-PWY-1	L-asparagine degradation III (mammalian)	3		100.0
ASPARAGINESYN-PWY	L-asparagine biosynthesis II	1		100.0
ASPARTATE-DEG1-PWY	L-aspartate degradation I	1		100.0
ASPARTATESYN-PWY	L-aspartate biosynthesis L-aspartate biosynthesis and degradation	1		100.0
ASPASN-PWY	Superpathway of L-aspartate and L-asparagine biosynthesis Interconversion of L-aspartate and L-asparagine	4		56.99999999999999
BETSYN-PWY	Glycine betaine biosynthesis I (Gram-negative bacteria)	2		100.0
BGALACT-PWY	Lactose degradation III Lactose degradation 3	1		100.0
BSUBPOLYAMSYN-PWY	Spermidine biosynthesis I Arginine degradation to spermidine Spermidine biosynthesis	2		100.0
CALVIN-PWY	Calvin-Benson-Bassham cycle Photosynthetic dark reactions Photosynthetic CO2 fixation Reductive pentose phosphate pathway Calvin cycle Carbon fixation Calvin-Benson cycle	13		100.0
CENTFERM-PWY	Pyruvate fermentation to butanoate Central fermentation pathway Acetobutylicum fermentation Pyruvate fermentation to butyrate	4		56.99999999999999
CHLOROPHYLL-SYN	3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) Light-dependent aerobic 3,8-divinyl-chlorophyllide a biosynthesis I	9		100.0
CHOLINE-BETAINE-ANA-PWY	Choline degradation I Choline betaine anabolism	2		100.0
CITRULBIO-PWY	L-citrulline biosynthesis	6		75.0
CITRULLINE-DEG-PWY	L-citrulline degradation	1		50.0
COA-PWY	Coenzyme A biosynthesis I CoA biosynthesis	3		75.0
COA-PWY-1	Coenzyme A biosynthesis II (mammalian) CoA biosynthesis	4		133.0
COBALSYN-PWY	Adenosylcobalamin salvage from cobinamide I Vitamin B12 biosynthesis	1		17.0
CODH-PWY	Reductive acetyl coenzyme A pathway I (homoacetogenic bacteria) Wood pathway Acetate synthesis Acetyl-CoA pathway Carbon monoxide dehydrogenase pathway Carbon fixation CO2 fixation Ljungdahl-Wood pathway Wood-Ljungdahl pathway Reductive acetyl CoA pathway	4		44.0
COLANSYN-PWY	Colanic acid building blocks biosynthesis	5		45.0
CRNFORCAT-PWY	Creatinine degradation I Creatinine catabolism	1		25.0
CYANCAT-PWY	Cyanate degradation Cyanate catabolism	1		33.0
CYSTEINE-DEG-PWY	L-cysteine degradation I Cysteine degradation I	1		33.0
CYSTSYN-PWY	L-cysteine biosynthesis I	2		100.0
DAPLYSINESYN-PWY	L-lysine biosynthesis I L-lysine and L-diaminopimelate biosynthesis	6		67.0
DARABITOLUTIL-PWY	D-arabitol degradation D-arabitol utilization	1		50.0
DETOX1-PWY	Superoxide radicals degradation Removal of superoxide radicals	2		100.0
DETOX1-PWY-1	Reactive oxygen species degradation Removal of superoxide radicals	4		67.0
DHGLUCONATE-PYR-CAT-PWY	Glucose degradation (oxidative) 2-dehydro-D-gluconate pyruvate catabolism 2-dehydro-D-gluconate pyruvate degradation 2-dehydro-D-gluconate degradation	1	5	20.0
... further results

@@ Line 3: / Line 3: @@
 | ?reaction found
 | ?reaction not found
-| ?ratio
+| ?completion rate
 }}

Difference between revisions of "CHC T00009146001"

Revision as of 11:44, 31 January 2018

Navigation menu

Personal tools

Namespaces

Variants

Views

More

Search

Navigation

Metabolic network components

Reconstruction categories

Reconstruction tools

Reconstruction sources

Tools