Difference between revisions of "TRANS-RXN0-623"

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(Created page with "Category:Gene == Gene CHC_T00009162001 == * left end position: ** 6446 * transcription direction: ** NEGATIVE * right end position: ** 7603 * centisome position: ** 82.992...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRANS-RXN0-623 TRANS-RXN0-623] == * direction: ** LEFT-TO-RIGHT * common name: ** long-chain-fatty-...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene CHC_T00009162001 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRANS-RXN0-623 TRANS-RXN0-623] ==
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* left end position:
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* direction:
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** 6446
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** NEGATIVE
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** long-chain-fatty-acid-CoA ligase
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* right end position:
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* ec number:
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** 7603
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** [http://enzyme.expasy.org/EC/6.2.1.3 EC-6.2.1.3]
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* centisome position:
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** 82.99215   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[ISOCITRATE-DEHYDROGENASE-NAD+-RXN]]
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* With identifiers:
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** original_genome
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** 1 [[ATP]][c] '''+''' 1 [[CPD66-39]][e] '''+''' 1 [[PROTON]][e] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Saturated-Fatty-Acyl-CoA]][c] '''+''' 1 [[PPI]][c]
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***automated-name-match
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* With common name(s):
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== Pathways associated ==
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** 1 ATP[c] '''+''' 1 a 2,3,4-saturated fatty acid[e] '''+''' 1 H+[e] '''+''' 1 coenzyme A[c] '''=>''' 1 AMP[c] '''+''' 1 H+[c] '''+''' 1 a 2,3,4-saturated fatty acyl CoA[c] '''+''' 1 diphosphate[c]
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* [[PWY-5690]]
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* [[PWY66-398]]
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== Genes associated with this reaction  ==
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* [[PWY-6549]]
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[CHC_T00009428001]]
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** Source: [[annotation-original_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[CHC_T00008160001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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* Gene: [[CHC_T00008811001]]
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** Source: [[annotation-original_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[CHC_T00008500001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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* Gene: [[CHC_T00008811001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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* Gene: [[CHC_T00009428001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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== Pathways ==
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-galdieria.sulphuraria]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-original_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=6446}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: transcription direction=NEGATIVE}}
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{{#set: common name=long-chain-fatty-acid-CoA ligase}}
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{{#set: right end position=7603}}
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{{#set: ec number=EC-6.2.1.3}}
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{{#set: centisome position=82.99215    }}
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{{#set: gene associated=CHC_T00009428001|CHC_T00008160001_1|CHC_T00008811001|CHC_T00008500001_1|CHC_T00008811001_1|CHC_T00009428001_1}}
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{{#set: reaction associated=ISOCITRATE-DEHYDROGENASE-NAD+-RXN}}
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{{#set: in pathway=}}
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{{#set: pathway associated=PWY-5690|PWY66-398|PWY-6549}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-original_genome|orthology-ectocarpus_siliculosus|orthology-galdieria.sulphuraria}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 15:53, 23 May 2018

Reaction TRANS-RXN0-623

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • long-chain-fatty-acid-CoA ligase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ATP[c] + 1 a 2,3,4-saturated fatty acid[e] + 1 H+[e] + 1 coenzyme A[c] => 1 AMP[c] + 1 H+[c] + 1 a 2,3,4-saturated fatty acyl CoA[c] + 1 diphosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=TRANS-RXN0-623&oldid=12430"