Difference between revisions of "RXN-12195"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PRPPSYN-RXN PRPPSYN-RXN] == * direction: ** REVERSIBLE * common name: ** Ribose-phosphate pyrophosp...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12195 RXN-12195] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PRPPSYN-RXN PRPPSYN-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12195 RXN-12195] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
−
* common name:
+
−
** Ribose-phosphate pyrophosphokinase
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.7.6.1 EC-2.7.6.1]
+
** [http://enzyme.expasy.org/EC/3.6.1.15 EC-3.6.1.15]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[ATP]][c] '''+''' 1 [[RIBOSE-5P]][c] '''<=>''' 1 [[PROTON]][c] '''+''' 1 [[PRPP]][c] '''+''' 1 [[AMP]][c]
+
** 1 [[WATER]][c] '''+''' 1 [[CTP]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[CDP]][c] '''+''' 1 [[Pi]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 ATP[c] '''+''' 1 D-ribose 5-phosphate[c] '''<=>''' 1 H+[c] '''+''' 1 5-phospho-&alpha;-D-ribose 1-diphosphate[c] '''+''' 1 AMP[c]
+
** 1 H2O[c] '''+''' 1 CTP[c] '''=>''' 1 H+[c] '''+''' 1 CDP[c] '''+''' 1 phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[CHC_T00008865001]]
+
* Gene: [[CHC_T00001236001_1]]
−
** ORIGINAL_GENOME
+
** Source: [[orthology-galdieria.sulphuraria]]
−
***AUTOMATED-NAME-MATCH
+
* Gene: [[CHC_T00010157001_1]]
−
* [[CHC_T00007508001_1]]
+
** Source: [[orthology-ectocarpus_siliculosus]]
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
* Gene: [[CHC_T00004941001_1]]
−
* [[CHC_T00008865001_1]]
+
** Source: [[orthology-ectocarpus_siliculosus]]
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
* Gene: [[CHC_T00000060001_1]]
−
** [[pantograph]]-[[a.taliana]]
+
** Source: [[orthology-ectocarpus_siliculosus]]
−
* [[CHC_T00008613001_1]]
+
* Gene: [[CHC_T00007176001_1]]
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[CHC_T00005746001_1]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[CHC_T00006198001_1]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY0-662]], PRPP biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-662 PWY0-662]
+
* [[PWY-7184]], pyrimidine deoxyribonucleotides de novo biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7184 PWY-7184]
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
** '''9''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-7198]], pyrimidine deoxyribonucleotides de novo biosynthesis IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7198 PWY-7198]
 +
** '''6''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-6545]], pyrimidine deoxyribonucleotides de novo biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6545 PWY-6545]
 +
** '''8''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-7210]], pyrimidine deoxyribonucleotides biosynthesis from CTP: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7210 PWY-7210]
 +
** '''8''' reactions found over '''8''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-ectocarpus_siliculosus]]
−
*** [[galdieria.sulphuraria]]
+
*** Tool: [[pantograph]]
−
*** [[a.taliana]]
+
** Source: [[orthology-galdieria.sulphuraria]]
−
* [[annotation]]:
+
*** Tool: [[pantograph]]
−
** [[pathwaytools]]:
+
−
*** [[original_genome]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15609 15609]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01049 R01049]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00569 R00569]
−
* UNIPROT:
+
{{#set: direction=LEFT-TO-RIGHT}}
−
** [http://www.uniprot.org/uniprot/Q63468 Q63468]
+
{{#set: ec number=EC-3.6.1.15}}
−
** [http://www.uniprot.org/uniprot/Q9CEI4 Q9CEI4]
+
{{#set: gene associated=CHC_T00001236001_1|CHC_T00010157001_1|CHC_T00004941001_1|CHC_T00000060001_1|CHC_T00007176001_1|CHC_T00005746001_1|CHC_T00006198001_1}}
−
** [http://www.uniprot.org/uniprot/O67556 O67556]
+
{{#set: in pathway=PWY-7184|PWY-7198|PWY-6545|PWY-7210}}
−
** [http://www.uniprot.org/uniprot/P44328 P44328]
+
−
** [http://www.uniprot.org/uniprot/Q9PP15 Q9PP15]
+
−
** [http://www.uniprot.org/uniprot/P56184 P56184]
+
−
** [http://www.uniprot.org/uniprot/P65235 P65235]
+
−
** [http://www.uniprot.org/uniprot/Q9CHB8 Q9CHB8]
+
−
** [http://www.uniprot.org/uniprot/P42816 P42816]
+
−
** [http://www.uniprot.org/uniprot/Q59988 Q59988]
+
−
** [http://www.uniprot.org/uniprot/P14193 P14193]
+
−
** [http://www.uniprot.org/uniprot/P0A1V6 P0A1V6]
+
−
** [http://www.uniprot.org/uniprot/P0A717 P0A717]
+
−
** [http://www.uniprot.org/uniprot/P60891 P60891]
+
−
** [http://www.uniprot.org/uniprot/P11908 P11908]
+
−
** [http://www.uniprot.org/uniprot/P21108 P21108]
+
−
** [http://www.uniprot.org/uniprot/P60892 P60892]
+
−
** [http://www.uniprot.org/uniprot/P09330 P09330]
+
−
** [http://www.uniprot.org/uniprot/P32895 P32895]
+
−
** [http://www.uniprot.org/uniprot/Q59489 Q59489]
+
−
** [http://www.uniprot.org/uniprot/P38620 P38620]
+
−
** [http://www.uniprot.org/uniprot/P38063 P38063]
+
−
** [http://www.uniprot.org/uniprot/P38689 P38689]
+
−
** [http://www.uniprot.org/uniprot/Q42581 Q42581]
+
−
** [http://www.uniprot.org/uniprot/P41831 P41831]
+
−
** [http://www.uniprot.org/uniprot/P46585 P46585]
+
−
** [http://www.uniprot.org/uniprot/Q42583 Q42583]
+
−
** [http://www.uniprot.org/uniprot/Q14558 Q14558]
+
−
** [http://www.uniprot.org/uniprot/Q55848 Q55848]
+
−
** [http://www.uniprot.org/uniprot/Q49042 Q49042]
+
−
** [http://www.uniprot.org/uniprot/O64888 O64888]
+
−
** [http://www.uniprot.org/uniprot/Q680A5 Q680A5]
+
−
** [http://www.uniprot.org/uniprot/Q93Z66 Q93Z66]
+
−
{{#set: direction=REVERSIBLE}}
+
−
{{#set: common name=Ribose-phosphate pyrophosphokinase}}
+
−
{{#set: ec number=EC-2.7.6.1}}
+
−
{{#set: gene associated=CHC_T00008865001|CHC_T00007508001_1|CHC_T00008865001_1|CHC_T00008613001_1}}
+
−
{{#set: in pathway=PWY0-662}}
+
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-ectocarpus_siliculosus|orthology-galdieria.sulphuraria}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=galdieria.sulphuraria|a.taliana}}
 
−
{{#set: reconstruction category=annotation}}
 
−
{{#set: reconstruction tool=pathwaytools}}
 
−
{{#set: reconstruction source=original_genome}}
 

Revision as of 15:54, 23 May 2018

Reaction RXN-12195

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H2O[c] + 1 CTP[c] => 1 H+[c] + 1 CDP[c] + 1 phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7184, pyrimidine deoxyribonucleotides de novo biosynthesis I: PWY-7184
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-7198, pyrimidine deoxyribonucleotides de novo biosynthesis IV: PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-6545, pyrimidine deoxyribonucleotides de novo biosynthesis III: PWY-6545
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-7210, pyrimidine deoxyribonucleotides biosynthesis from CTP: PWY-7210
    • 8 reactions found over 8 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=RXN-12195&oldid=12527"