Difference between revisions of "CHC T00008575001"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.5.1.20-RXN 1.5.1.20-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.o...")
(Created page with "Category:Gene == Gene CHC_T00008575001 == * left end position: ** 166944 * transcription direction: ** NEGATIVE * right end position: ** 168494 * centisome position: ** 37...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.5.1.20-RXN 1.5.1.20-RXN] ==
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== Gene CHC_T00008575001 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 166944
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/1.5.1.20 EC-1.5.1.20]
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** NEGATIVE
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* right end position:
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** 168494
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* centisome position:
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** 37.817192   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[SUCCSEMIALDDEHYDROG-RXN]]
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** 1 [[NADH]][c] '''+''' 1 [[METHYLENE-THF-GLU-N]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[5-METHYL-THF-GLU-N]][c] '''+''' 1 [[NAD]][c]
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** Source: [[annotation-original_genome]]
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* With common name(s):
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*** Assignment: automated-name-match
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** 1 NADH[c] '''+''' 1 a 5,10-methylene-tetrahydrofolate[c] '''+''' 1 H+[c] '''=>''' 1 an N5-methyl-tetrahydrofolate[c] '''+''' 1 NAD+[c]
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== Pathways associated ==
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* [[PWY-6537]]
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== Genes associated with this reaction  ==
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* [[3-HYDROXYPHENYLACETATE-DEGRADATION-PWY]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[PWY-6993]]
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* [[CHC_T00008486001_1]]
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* [[P105-PWY]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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* [[P181-PWY]]
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== Pathways ==
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* [[PWY-2201]], folate transformations I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2201 PWY-2201]
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** '''5''' reactions found over '''12''' reactions in the full pathway
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* [[1CMET2-PWY]], N10-formyl-tetrahydrofolate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=1CMET2-PWY 1CMET2-PWY]
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** '''6''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-3841]], folate transformations II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3841 PWY-3841]
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** '''7''' reactions found over '''11''' reactions in the full pathway
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* [[CODH-PWY]], reductive acetyl coenzyme A pathway I (homoacetogenic bacteria): [http://metacyc.org/META/NEW-IMAGE?object=CODH-PWY CODH-PWY]
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** '''4''' reactions found over '''9''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[galdieria.sulphuraria]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: left end position=166944}}
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** [http://www.genome.jp/dbget-bin/www_bget?R07168 R07168]
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{{#set: transcription direction=NEGATIVE}}
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* UNIPROT:
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{{#set: right end position=168494}}
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** [http://www.uniprot.org/uniprot/Q9PN93 Q9PN93]
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{{#set: centisome position=37.817192    }}
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** [http://www.uniprot.org/uniprot/Q9JUT7 Q9JUT7]
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{{#set: reaction associated=SUCCSEMIALDDEHYDROG-RXN}}
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** [http://www.uniprot.org/uniprot/P45208 P45208]
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{{#set: pathway associated=PWY-6537|3-HYDROXYPHENYLACETATE-DEGRADATION-PWY|PWY-6993|P105-PWY|P181-PWY}}
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** [http://www.uniprot.org/uniprot/P0AEZ1 P0AEZ1]
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** [http://www.uniprot.org/uniprot/P11003 P11003]
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** [http://www.uniprot.org/uniprot/P46151 P46151]
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** [http://www.uniprot.org/uniprot/P53128 P53128]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: ec number=EC-1.5.1.20}}
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{{#set: gene associated=CHC_T00008486001_1}}
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{{#set: in pathway=PWY-2201|1CMET2-PWY|PWY-3841|CODH-PWY}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=galdieria.sulphuraria}}
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Revision as of 15:00, 23 May 2018

Gene CHC_T00008575001

  • left end position:
    • 166944
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 168494
  • centisome position:
    • 37.817192
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=CHC_T00008575001&oldid=12883"