Difference between revisions of "RXN-13614"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=LONG-CHAIN-ALCOHOL-DEHYDROGENASE-RXN-CPD-7873/NAD/WATER//STEARIC_ACID/NADH/PROTON.45. LONG-CHAIN-AL...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13614 RXN-13614] == * direction: ** LEFT-TO-RIGHT * common name: ** long-chain-fatty-acid-CoA l...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=LONG-CHAIN-ALCOHOL-DEHYDROGENASE-RXN-CPD-7873/NAD/WATER//STEARIC_ACID/NADH/PROTON.45. LONG-CHAIN-ALCOHOL-DEHYDROGENASE-RXN-CPD-7873/NAD/WATER//STEARIC_ACID/NADH/PROTON.45.] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13614 RXN-13614] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 +
* common name:
 +
** long-chain-fatty-acid-CoA ligase
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/6.2.1.3 EC-6.2.1.3]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 2.0 [[NAD]][c] '''+''' 1.0 [[WATER]][c] '''+''' 1.0 [[CPD-7873]][c] '''<=>''' 2.0 [[NADH]][c] '''+''' 1.0 [[STEARIC_ACID]][c] '''+''' 3.0 [[PROTON]][c]
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** 1 [[ATP]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[CPD-3617]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[CPD-10267]][c]
 
* With common name(s):
 
* With common name(s):
−
** 2.0 NAD+[c] '''+''' 1.0 H2O[c] '''+''' 1.0 1-octadecanol[c] '''<=>''' 2.0 NADH[c] '''+''' 1.0 stearate[c] '''+''' 3.0 H+[c]
+
** 1 ATP[c] '''+''' 1 coenzyme A[c] '''+''' 1 decanoate[c] '''=>''' 1 AMP[c] '''+''' 1 diphosphate[c] '''+''' 1 decanoyl-CoA[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[CHC_T00009428001_1]]
 +
** Source: [[orthology-galdieria.sulphuraria]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[CHC_T00009428001]]
 +
** Source: [[annotation-original_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[CHC_T00008811001]]
 +
** Source: [[annotation-original_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[CHC_T00008160001_1]]
 +
** Source: [[orthology-galdieria.sulphuraria]]
 +
* Gene: [[CHC_T00008811001_1]]
 +
** Source: [[orthology-galdieria.sulphuraria]]
 +
* Gene: [[CHC_T00008500001_1]]
 +
** Source: [[orthology-galdieria.sulphuraria]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-7094]], fatty acid salvage: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7094 PWY-7094]
 +
** '''4''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[gap-filling]]:
+
* Category: [[orthology]]
−
** [[meneco]]:
+
** Source: [[orthology-ectocarpus_siliculosus]]
−
*** [[added for gapfilling]]
+
*** Tool: [[pantograph]]
 +
** Source: [[orthology-galdieria.sulphuraria]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-original_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=REVERSIBLE}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: in pathway=}}
+
{{#set: common name=long-chain-fatty-acid-CoA ligase}}
−
{{#set: reconstruction category=gap-filling}}
+
{{#set: ec number=EC-6.2.1.3}}
−
{{#set: reconstruction tool=meneco}}
+
{{#set: gene associated=CHC_T00009428001_1|CHC_T00009428001|CHC_T00008811001|CHC_T00008160001_1|CHC_T00008811001_1|CHC_T00008500001_1}}
−
{{#set: reconstruction source=added for gapfilling}}
+
{{#set: in pathway=PWY-7094}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-original_genome|orthology-ectocarpus_siliculosus|orthology-galdieria.sulphuraria}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 15:01, 23 May 2018

Reaction RXN-13614

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • long-chain-fatty-acid-CoA ligase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ATP[c] + 1 coenzyme A[c] + 1 decanoate[c] => 1 AMP[c] + 1 diphosphate[c] + 1 decanoyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7094, fatty acid salvage: PWY-7094
    • 4 reactions found over 6 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=RXN-13614&oldid=12921"