Difference between revisions of "RXN-6883"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLYRIBONUCSYN-RXN GLYRIBONUCSYN-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzym...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-6883 RXN-6883] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/1....")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLYRIBONUCSYN-RXN GLYRIBONUCSYN-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-6883 RXN-6883] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/6.3.4.13 EC-6.3.4.13]
+
** [http://enzyme.expasy.org/EC/1.10.3.11 EC-1.10.3.11]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[5-P-BETA-D-RIBOSYL-AMINE]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[GLY]][c] '''=>''' 1 [[5-PHOSPHO-RIBOSYL-GLYCINEAMIDE]][c] '''+''' 1 [[Pi]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c]
+
** 1 [[OXYGEN-MOLECULE]][c] '''+''' 2 [[Ubiquinols]][c] '''=>''' 2 [[WATER]][c] '''+''' 2 [[Ubiquinones]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 5-phospho-β-D-ribosylamine[c] '''+''' 1 ATP[c] '''+''' 1 glycine[c] '''=>''' 1 N1-(5-phospho-β-D-ribosyl)glycinamide[c] '''+''' 1 phosphate[c] '''+''' 1 ADP[c] '''+''' 1 H+[c]
+
** 1 oxygen[c] '''+''' 2 an ubiquinol[c] '''=>''' 2 H2O[c] '''+''' 2 a ubiquinone[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[CHC_T00000892001_1]]
+
* Gene: [[CHC_T00008172001_1]]
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
** Source: [[orthology-ectocarpus_siliculosus]]
−
** [[pantograph]]-[[a.taliana]]
+
* Gene: [[CHC_T00008174001_1]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[CHC_T00000162001_1]]
 +
** Source: [[orthology-galdieria.sulphuraria]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6121]], 5-aminoimidazole ribonucleotide biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6121 PWY-6121]
+
* [[PWY-4302]], aerobic respiration III (alternative oxidase pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY-4302 PWY-4302]
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-6122]], 5-aminoimidazole ribonucleotide biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6122 PWY-6122]
+
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
−
* [[PWY-6277]], superpathway of 5-aminoimidazole ribonucleotide biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6277 PWY-6277]
+
−
** '''7''' reactions found over '''9''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-ectocarpus_siliculosus]]
−
*** [[galdieria.sulphuraria]]
+
*** Tool: [[pantograph]]
−
*** [[a.taliana]]
+
** Source: [[orthology-galdieria.sulphuraria]]
−
* [[annotation]]:
+
*** Tool: [[pantograph]]
−
** [[pathwaytools]]:
+
−
*** [[original_genome]]
+
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17453 17453]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30258 30258]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R04144 R04144]
+
** [http://www.genome.jp/dbget-bin/www_bget?R09504 R09504]
−
* UNIPROT:
+
−
** [http://www.uniprot.org/uniprot/P07244 P07244]
+
−
** [http://www.uniprot.org/uniprot/Q58347 Q58347]
+
−
** [http://www.uniprot.org/uniprot/P12039 P12039]
+
−
** [http://www.uniprot.org/uniprot/P21872 P21872]
+
−
** [http://www.uniprot.org/uniprot/P15640 P15640]
+
−
** [http://www.uniprot.org/uniprot/P00967 P00967]
+
−
** [http://www.uniprot.org/uniprot/P16340 P16340]
+
−
** [http://www.uniprot.org/uniprot/P22102 P22102]
+
−
** [http://www.uniprot.org/uniprot/Q9JWU6 Q9JWU6]
+
−
** [http://www.uniprot.org/uniprot/P43845 P43845]
+
−
** [http://www.uniprot.org/uniprot/Q9PN47 Q9PN47]
+
−
** [http://www.uniprot.org/uniprot/Q64737 Q64737]
+
−
** [http://www.uniprot.org/uniprot/P20772 P20772]
+
−
** [http://www.uniprot.org/uniprot/P26977 P26977]
+
−
** [http://www.uniprot.org/uniprot/Q59492 Q59492]
+
−
** [http://www.uniprot.org/uniprot/P74232 P74232]
+
−
** [http://www.uniprot.org/uniprot/Q42804 Q42804]
+
−
** [http://www.uniprot.org/uniprot/P52421 P52421]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-6.3.4.13}}
+
{{#set: ec number=EC-1.10.3.11}}
−
{{#set: gene associated=CHC_T00000892001_1}}
+
{{#set: gene associated=CHC_T00008172001_1|CHC_T00008174001_1|CHC_T00000162001_1}}
−
{{#set: in pathway=PWY-6121|PWY-6122|PWY-6277}}
+
{{#set: in pathway=PWY-4302}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-ectocarpus_siliculosus|orthology-galdieria.sulphuraria}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=galdieria.sulphuraria|a.taliana}}
 
−
{{#set: reconstruction category=annotation}}
 
−
{{#set: reconstruction tool=pathwaytools}}
 
−
{{#set: reconstruction source=original_genome}}
 

Revision as of 16:02, 23 May 2018

Reaction RXN-6883

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-4302, aerobic respiration III (alternative oxidase pathway): PWY-4302
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=RXN-6883&oldid=12967"