Difference between revisions of "CHC T00009270001"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13162 RXN-13162] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
(Created page with "Category:Gene == Gene CHC_T00009270001 == * left end position: ** 189450 * transcription direction: ** POSITIVE * right end position: ** 190634 * centisome position: ** 79...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13162 RXN-13162] ==
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== Gene CHC_T00009270001 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 189450
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/2.5.1.21 EC-2.5.1.21]
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** POSITIVE
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* right end position:
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** 190634
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* centisome position:
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** 79.108574   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[HISTONE-ACETYLTRANSFERASE-RXN]]
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** 2 [[FARNESYL-PP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[NADH-P-OR-NOP]][c] '''=>''' 1 [[SQUALENE]][c] '''+''' 1 [[NAD-P-OR-NOP]][c] '''+''' 2 [[PPI]][c]
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** Source: [[annotation-original_genome]]
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* With common name(s):
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*** Assignment: automated-name-match
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** 2 (2E,6E)-farnesyl diphosphate[c] '''+''' 1 H+[c] '''+''' 1 NAD(P)H[c] '''=>''' 1 squalene[c] '''+''' 1 NAD(P)+[c] '''+''' 2 diphosphate[c]
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== Pathways associated ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[CHC_T00001581001_1]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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== Pathways  ==
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* [[PWY-5670]], epoxysqualene biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5670 PWY-5670]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[galdieria.sulphuraria]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=189450}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=32302 32302]
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{{#set: transcription direction=POSITIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=32296 32296]
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{{#set: right end position=190634}}
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* LIGAND-RXN:
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{{#set: centisome position=79.108574    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R06223 R06223]
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{{#set: reaction associated=HISTONE-ACETYLTRANSFERASE-RXN}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: ec number=EC-2.5.1.21}}
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{{#set: gene associated=CHC_T00001581001_1}}
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{{#set: in pathway=PWY-5670}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=galdieria.sulphuraria}}
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Latest revision as of 15:23, 23 May 2018

Gene CHC_T00009270001

  • left end position:
    • 189450
  • transcription direction:
    • POSITIVE
  • right end position:
    • 190634
  • centisome position:
    • 79.108574
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=CHC_T00009270001&oldid=14191"