Difference between revisions of "RXN66-472"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIOHBUTANONEPSYN-RXN DIOHBUTANONEPSYN-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http:/...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-472 RXN66-472] == * direction: ** LEFT-TO-RIGHT * common name: ** fatty aldehyde dehydrogenas...")
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIOHBUTANONEPSYN-RXN DIOHBUTANONEPSYN-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-472 RXN66-472] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* common name:
 +
** fatty aldehyde dehydrogenase
 +
** aldehyde dehydrogenase, (NAD) activity
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/4.1.99.12 EC-4.1.99.12]
+
** [http://enzyme.expasy.org/EC/1.2.1.3 EC-1.2.1.3]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[RIBULOSE-5P]][c] '''=>''' 1 [[FORMATE]][c] '''+''' 1 [[DIHYDROXY-BUTANONE-P]][c] '''+''' 1 [[PROTON]][c]
+
** 1 [[NAD]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[2-Me-Branched-234-Sat-FALD]][c] '''=>''' 2 [[PROTON]][c] '''+''' 1 [[2-Me-Branched-234-Sat-FA]][c] '''+''' 1 [[NADH]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 D-ribulose 5-phosphate[c] '''=>''' 1 formate[c] '''+''' 1 1-deoxy-L-glycero-tetrulose 4-phosphate[c] '''+''' 1 H+[c]
+
** 1 NAD+[c] '''+''' 1 H2O[c] '''+''' 1 a 2-methyl branched 2,3,4-saturated fatty aldehyde[c] '''=>''' 2 H+[c] '''+''' 1 a 2-methyl branched 2,3,4-saturated fatty acid[c] '''+''' 1 NADH[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[CHC_T00001056001_1]]
+
* Gene: [[CHC_T00008341001]]
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
** Source: [[annotation-original_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[CHC_T00008341001_1]]
 +
** Source: [[orthology-galdieria.sulphuraria]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6167]], flavin biosynthesis II (archaea): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6167 PWY-6167]
+
* [[PWY66-387]], fatty acid α-oxidation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-387 PWY66-387]
−
** '''4''' reactions found over '''10''' reactions in the full pathway
+
** '''4''' reactions found over '''6''' reactions in the full pathway
−
* [[PWY-6168]], flavin biosynthesis III (fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6168 PWY-6168]
+
−
** '''6''' reactions found over '''9''' reactions in the full pathway
+
−
* [[RIBOSYN2-PWY]], flavin biosynthesis I (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=RIBOSYN2-PWY RIBOSYN2-PWY]
+
−
** '''8''' reactions found over '''9''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-galdieria.sulphuraria]]
−
*** [[galdieria.sulphuraria]]
+
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-original_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18457 18457]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R07281 R07281]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-4.1.99.12}}
+
{{#set: common name=fatty aldehyde dehydrogenase}}
−
{{#set: gene associated=CHC_T00001056001_1}}
+
{{#set: common name=aldehyde dehydrogenase, (NAD) activity}}
−
{{#set: in pathway=PWY-6167|PWY-6168|RIBOSYN2-PWY}}
+
{{#set: ec number=EC-1.2.1.3}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: gene associated=CHC_T00008341001|CHC_T00008341001_1}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: in pathway=PWY66-387}}
−
{{#set: reconstruction source=galdieria.sulphuraria}}
+
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-original_genome|orthology-galdieria.sulphuraria}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 16:31, 23 May 2018

Reaction RXN66-472

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • fatty aldehyde dehydrogenase
    • aldehyde dehydrogenase, (NAD) activity
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY66-387, fatty acid α-oxidation II: PWY66-387
    • 4 reactions found over 6 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=RXN66-472&oldid=14550"