Difference between revisions of "TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN"
From metabolic_network
(Created page with "Category:Gene == Gene CHC_T00009208001_1 == * Synonym(s): == Reactions associated == * TRANS-RXN1HP7-23 ** pantograph-galdieria.sulphuraria == Pathways associ...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN] == * direction: ** LEFT-TO-RIG...") |
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− | [[Category: | + | [[Category:Reaction]] |
− | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN] == |
+ | * direction: | ||
+ | ** LEFT-TO-RIGHT | ||
+ | * ec number: | ||
+ | ** [http://enzyme.expasy.org/EC/5.4.99.12 EC-5.4.99.12] | ||
* Synonym(s): | * Synonym(s): | ||
− | == | + | == Reaction Formula == |
− | * [[ | + | * With identifiers: |
− | ** [[ | + | ** 1 [[tRNA-uridine-38-40]][c] '''=>''' 1 [[tRNA-pseudouridine-38-40]][c] |
− | == Pathways | + | * With common name(s): |
+ | ** 1 a uridine38-40 in tRNA[c] '''=>''' 1 a pseudouridine38-40 in tRNA[c] | ||
+ | |||
+ | == Genes associated with this reaction == | ||
+ | Genes have been associated with this reaction based on different elements listed below. | ||
+ | * Gene: [[CHC_T00006579001_1]] | ||
+ | ** Source: [[orthology-galdieria.sulphuraria]] | ||
+ | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
+ | * Gene: [[CHC_T00003130001_1]] | ||
+ | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
+ | * Gene: [[CHC_T00006204001_1]] | ||
+ | ** Source: [[orthology-galdieria.sulphuraria]] | ||
+ | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
+ | * Gene: [[CHC_T00001139001_1]] | ||
+ | ** Source: [[orthology-galdieria.sulphuraria]] | ||
+ | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
+ | * Gene: [[CHC_T00005989001_1]] | ||
+ | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
+ | * Gene: [[CHC_T00009542001_1]] | ||
+ | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
+ | * Gene: [[CHC_T00006048001_1]] | ||
+ | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
+ | * Gene: [[CHC_T00004120001_1]] | ||
+ | ** Source: [[orthology-galdieria.sulphuraria]] | ||
+ | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
+ | * Gene: [[CHC_T00007304001_1]] | ||
+ | ** Source: [[orthology-galdieria.sulphuraria]] | ||
+ | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
+ | * Gene: [[CHC_T00001402001_1]] | ||
+ | ** Source: [[orthology-galdieria.sulphuraria]] | ||
+ | * Gene: [[CHC_T00001369001_1]] | ||
+ | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
+ | * Gene: [[CHC_T00006828001_1]] | ||
+ | ** Source: [[orthology-galdieria.sulphuraria]] | ||
+ | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
+ | * Gene: [[CHC_T00006820001_1]] | ||
+ | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
+ | == Pathways == | ||
+ | == Reconstruction information == | ||
+ | * Category: [[orthology]] | ||
+ | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
+ | *** Tool: [[pantograph]] | ||
+ | ** Source: [[orthology-galdieria.sulphuraria]] | ||
+ | *** Tool: [[pantograph]] | ||
== External links == | == External links == | ||
− | {{#set: | + | * LIGAND-RXN: |
+ | ** [http://www.genome.jp/dbget-bin/www_bget?R03020 R03020] | ||
+ | * UNIPROT: | ||
+ | ** [http://www.uniprot.org/uniprot/Q59069 Q59069] | ||
+ | ** [http://www.uniprot.org/uniprot/P47428 P47428] | ||
+ | ** [http://www.uniprot.org/uniprot/P45291 P45291] | ||
+ | ** [http://www.uniprot.org/uniprot/Q45557 Q45557] | ||
+ | ** [http://www.uniprot.org/uniprot/Q50291 Q50291] | ||
+ | ** [http://www.uniprot.org/uniprot/P53167 P53167] | ||
+ | ** [http://www.uniprot.org/uniprot/Q12211 Q12211] | ||
+ | ** [http://www.uniprot.org/uniprot/P73295 P73295] | ||
+ | ** [http://www.uniprot.org/uniprot/P07649 P07649] | ||
+ | {{#set: direction=LEFT-TO-RIGHT}} | ||
+ | {{#set: ec number=EC-5.4.99.12}} | ||
+ | {{#set: gene associated=CHC_T00006579001_1|CHC_T00003130001_1|CHC_T00006204001_1|CHC_T00001139001_1|CHC_T00005989001_1|CHC_T00009542001_1|CHC_T00006048001_1|CHC_T00004120001_1|CHC_T00007304001_1|CHC_T00001402001_1|CHC_T00001369001_1|CHC_T00006828001_1|CHC_T00006820001_1}} | ||
+ | {{#set: in pathway=}} | ||
+ | {{#set: reconstruction category=orthology}} | ||
+ | {{#set: reconstruction source=orthology-ectocarpus_siliculosus|orthology-galdieria.sulphuraria}} | ||
+ | {{#set: reconstruction tool=pantograph}} |
Revision as of 16:33, 23 May 2018
Contents
Reaction TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN
- direction:
- LEFT-TO-RIGHT
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 tRNA-uridine-38-40[c] => 1 tRNA-pseudouridine-38-40[c]
- With common name(s):
- 1 a uridine38-40 in tRNA[c] => 1 a pseudouridine38-40 in tRNA[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: CHC_T00006579001_1
- Source: orthology-galdieria.sulphuraria
- Source: orthology-ectocarpus_siliculosus
- Gene: CHC_T00003130001_1
- Source: orthology-ectocarpus_siliculosus
- Gene: CHC_T00006204001_1
- Source: orthology-galdieria.sulphuraria
- Source: orthology-ectocarpus_siliculosus
- Gene: CHC_T00001139001_1
- Source: orthology-galdieria.sulphuraria
- Source: orthology-ectocarpus_siliculosus
- Gene: CHC_T00005989001_1
- Source: orthology-ectocarpus_siliculosus
- Gene: CHC_T00009542001_1
- Source: orthology-ectocarpus_siliculosus
- Gene: CHC_T00006048001_1
- Source: orthology-ectocarpus_siliculosus
- Gene: CHC_T00004120001_1
- Source: orthology-galdieria.sulphuraria
- Source: orthology-ectocarpus_siliculosus
- Gene: CHC_T00007304001_1
- Source: orthology-galdieria.sulphuraria
- Source: orthology-ectocarpus_siliculosus
- Gene: CHC_T00001402001_1
- Source: orthology-galdieria.sulphuraria
- Gene: CHC_T00001369001_1
- Source: orthology-ectocarpus_siliculosus
- Gene: CHC_T00006828001_1
- Source: orthology-galdieria.sulphuraria
- Source: orthology-ectocarpus_siliculosus
- Gene: CHC_T00006820001_1
- Source: orthology-ectocarpus_siliculosus
Pathways
Reconstruction information
- Category: orthology
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-galdieria.sulphuraria
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
External links