Difference between revisions of "SAICARSYN-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SAICARSYN-RXN SAICARSYN-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy...")
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PLPSAL-PWY PLPSAL-PWY] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=SAICARSYN-RXN SAICARSYN-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33208 TAX-33208]
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
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* ec number:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** [http://enzyme.expasy.org/EC/6.3.2.6 EC-6.3.2.6]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
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* common name:
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** pyridoxal 5'-phosphate salvage I
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* Synonym(s):
 
* Synonym(s):
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** vitamin B6 salvage I
 
  
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== Reaction(s) found ==
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== Reaction Formula ==
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  '''5''' reactions found over '''5''' reactions in the full pathway
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* With identifiers:
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* [[PMPOXI-RXN]]
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** 1 [[PHOSPHORIBOSYL-CARBOXY-AMINOIMIDAZOLE]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[L-ASPARTATE]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[P-RIBOSYL-4-SUCCCARB-AMINOIMIDAZOLE]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[Pi]][c]
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* [[PNKIN-RXN]]
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* With common name(s):
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* [[PNPOXI-RXN]]
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** 1 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate[c] '''+''' 1 ATP[c] '''+''' 1 L-aspartate[c] '''=>''' 1 H+[c] '''+''' 1 5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole[c] '''+''' 1 ADP[c] '''+''' 1 phosphate[c]
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* [[PYRAMKIN-RXN]]
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* [[PYRIDOXKIN-RXN]]
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== Genes associated with this reaction  ==
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== Reaction(s) not found ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[CHC_T00009497001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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== Pathways ==
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* [[PWY-6123]], inosine-5'-phosphate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6123 PWY-6123]
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** '''4''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-6124]], inosine-5'-phosphate biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6124 PWY-6124]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-7234]], inosine-5'-phosphate biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7234 PWY-7234]
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** '''3''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-galdieria.sulphuraria]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
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* ECOCYC:
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* RHEA:
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PLPSAL-PWY PLPSAL-PWY]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22628 22628]
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* ARACYC:
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* LIGAND-RXN:
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** [http://metacyc.org/ARA/NEW-IMAGE?object=PLPSAL-PWY PLPSAL-PWY]
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** [http://www.genome.jp/dbget-bin/www_bget?R04591 R04591]
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{{#set: taxonomic range=TAX-33208}}
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* UNIPROT:
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{{#set: taxonomic range=TAX-4751}}
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** [http://www.uniprot.org/uniprot/Q07296 Q07296]
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{{#set: taxonomic range=TAX-2}}
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** [http://www.uniprot.org/uniprot/Q9PHZ9 Q9PHZ9]
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{{#set: taxonomic range=TAX-33090}}
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** [http://www.uniprot.org/uniprot/P0A7D7 P0A7D7]
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{{#set: common name=pyridoxal 5'-phosphate salvage I}}
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** [http://www.uniprot.org/uniprot/P12046 P12046]
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{{#set: common name=vitamin B6 salvage I}}
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** [http://www.uniprot.org/uniprot/Q58987 Q58987]
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{{#set: reaction found=5}}
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** [http://www.uniprot.org/uniprot/Q9JV73 Q9JV73]
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{{#set: reaction not found=5}}
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** [http://www.uniprot.org/uniprot/P50124 P50124]
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{{#set: completion rate=100.0}}
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** [http://www.uniprot.org/uniprot/P27602 P27602]
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** [http://www.uniprot.org/uniprot/P27616 P27616]
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** [http://www.uniprot.org/uniprot/P22234 P22234]
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** [http://www.uniprot.org/uniprot/P73471 P73471]
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** [http://www.uniprot.org/uniprot/Q9R7D5 Q9R7D5]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: ec number=EC-6.3.2.6}}
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{{#set: gene associated=CHC_T00009497001_1}}
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{{#set: in pathway=PWY-6123|PWY-6124|PWY-7234}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-galdieria.sulphuraria}}
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{{#set: reconstruction tool=pantograph}}

Revision as of 15:47, 23 May 2018

Reaction SAICARSYN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6123, inosine-5'-phosphate biosynthesis I: PWY-6123
    • 4 reactions found over 6 reactions in the full pathway
  • PWY-6124, inosine-5'-phosphate biosynthesis II: PWY-6124
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-7234, inosine-5'-phosphate biosynthesis III: PWY-7234
    • 3 reactions found over 6 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=SAICARSYN-RXN&oldid=15301"