Difference between revisions of "GLUTDEHYD-RXN"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=IDP IDP] == * smiles: ** C(OP(=O)([O-])OP([O-])(=O)[O-])C1(OC(C(O)C(O)1)N3(C=NC2(C(=O)NC=NC=23)...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTDEHYD-RXN GLUTDEHYD-RXN] == * direction: ** REVERSIBLE * common name: ** Glutamate dehydrogenas...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=IDP IDP] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTDEHYD-RXN GLUTDEHYD-RXN] ==
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* smiles:
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* direction:
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** C(OP(=O)([O-])OP([O-])(=O)[O-])C1(OC(C(O)C(O)1)N3(C=NC2(C(=O)NC=NC=23)))
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** REVERSIBLE
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* inchi key:
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** InChIKey=JPXZQMKKFWMMGK-KQYNXXCUSA-K
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* common name:
 
* common name:
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** IDP
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** Glutamate dehydrogenase
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* molecular weight:
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* ec number:
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** 425.165   
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** [http://enzyme.expasy.org/EC/1.4.1.4 EC-1.4.1.4]
 
* Synonym(s):
 
* Synonym(s):
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** riboxin
 
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** inosine diphosphate
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[RXN-14003]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[WATER]][c] '''+''' 1 [[NADP]][c] '''+''' 1 [[GLT]][c] '''<=>''' 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[AMMONIUM]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[NADPH]][c]
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* [[RXN0-5073]]
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 H2O[c] '''+''' 1 NADP+[c] '''+''' 1 L-glutamate[c] '''<=>''' 1 2-oxoglutarate[c] '''+''' 1 ammonium[c] '''+''' 1 H+[c] '''+''' 1 NADPH[c]
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* [[RXN-14120]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[CHC_T00010235001]]
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** Source: [[annotation-original_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[CHC_T00010235001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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== Pathways  ==
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* [[GLUTSYNIII-PWY]], L-glutamate biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=GLUTSYNIII-PWY GLUTSYNIII-PWY]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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* [[PWY-5913]], partial TCA cycle (obligate autotrophs): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5913 PWY-5913]
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** '''10''' reactions found over '''11''' reactions in the full pathway
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* [[PWY-5675]], nitrate reduction V (assimilatory): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5675 PWY-5675]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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* [[PWY490-3]], nitrate reduction VI (assimilatory): [http://metacyc.org/META/NEW-IMAGE?object=PWY490-3 PWY490-3]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-galdieria.sulphuraria]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-original_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* CAS : 86-04-4
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* RHEA:
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* METABOLIGHTS : MTBLC58280
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11612 11612]
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* PUBCHEM:
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* LIGAND-RXN:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=7156952 7156952]
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** [http://www.genome.jp/dbget-bin/www_bget?R00248 R00248]
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* HMDB : HMDB03335
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* UNIPROT:
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* LIGAND-CPD:
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** [http://www.uniprot.org/uniprot/P07262 P07262]
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** [http://www.genome.jp/dbget-bin/www_bget?C00104 C00104]
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** [http://www.uniprot.org/uniprot/P15111 P15111]
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* CHEMSPIDER:
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** [http://www.uniprot.org/uniprot/P28724 P28724]
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** [http://www.chemspider.com/Chemical-Structure.3279691.html 3279691]
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** [http://www.uniprot.org/uniprot/P43793 P43793]
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* CHEBI:
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** [http://www.uniprot.org/uniprot/Q9JT56 Q9JT56]
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=58280 58280]
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** [http://www.uniprot.org/uniprot/P00370 P00370]
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* BIGG : idp
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** [http://www.uniprot.org/uniprot/P00369 P00369]
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{{#set: smiles=C(OP(=O)([O-])OP([O-])(=O)[O-])C1(OC(C(O)C(O)1)N3(C=NC2(C(=O)NC=NC=23)))}}
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** [http://www.uniprot.org/uniprot/P29507 P29507]
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{{#set: inchi key=InChIKey=JPXZQMKKFWMMGK-KQYNXXCUSA-K}}
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** [http://www.uniprot.org/uniprot/P28998 P28998]
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{{#set: common name=IDP}}
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** [http://www.uniprot.org/uniprot/P29051 P29051]
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{{#set: molecular weight=425.165    }}
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** [http://www.uniprot.org/uniprot/P31026 P31026]
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{{#set: common name=riboxin|inosine diphosphate}}
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** [http://www.uniprot.org/uniprot/P39475 P39475]
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{{#set: consumed by=RXN-14003}}
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** [http://www.uniprot.org/uniprot/P39708 P39708]
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{{#set: produced by=RXN0-5073}}
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** [http://www.uniprot.org/uniprot/P54387 P54387]
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{{#set: consumed or produced by=RXN-14120}}
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** [http://www.uniprot.org/uniprot/P54386 P54386]
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** [http://www.uniprot.org/uniprot/P95544 P95544]
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** [http://www.uniprot.org/uniprot/P78804 P78804]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=Glutamate dehydrogenase}}
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{{#set: ec number=EC-1.4.1.4}}
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{{#set: gene associated=CHC_T00010235001|CHC_T00010235001_1}}
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{{#set: in pathway=GLUTSYNIII-PWY|PWY-5913|PWY-5675|PWY490-3}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-original_genome|orthology-ectocarpus_siliculosus|orthology-galdieria.sulphuraria}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 15:59, 23 May 2018

Reaction GLUTDEHYD-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • Glutamate dehydrogenase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H2O[c] + 1 NADP+[c] + 1 L-glutamate[c] <=> 1 2-oxoglutarate[c] + 1 ammonium[c] + 1 H+[c] + 1 NADPH[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • GLUTSYNIII-PWY, L-glutamate biosynthesis III: GLUTSYNIII-PWY
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-5913, partial TCA cycle (obligate autotrophs): PWY-5913
    • 10 reactions found over 11 reactions in the full pathway
  • PWY-5675, nitrate reduction V (assimilatory): PWY-5675
    • 3 reactions found over 4 reactions in the full pathway
  • PWY490-3, nitrate reduction VI (assimilatory): PWY490-3
    • 3 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=GLUTDEHYD-RXN&oldid=15880"