Difference between revisions of "PWY-7817"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.1.1.34-RXN 1.1.1.34-RXN] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.expasy.org/...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7817 PWY-7817] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1239 TAX-12...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.1.1.34-RXN 1.1.1.34-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7817 PWY-7817] ==
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* direction:
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* taxonomic range:
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** REVERSIBLE
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1239 TAX-1239]
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* ec number:
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* common name:
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** [http://enzyme.expasy.org/EC/1.1.1.34 EC-1.1.1.34]
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** type I lipoteichoic acid biosynthesis (S. aureus)
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''5''' reactions found over '''16''' reactions in the full pathway
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** 1 [[MEVALONATE]][c] '''+''' 2 [[NADP]][c] '''+''' 1 [[CO-A]][c] '''<=>''' 1 [[3-HYDROXY-3-METHYL-GLUTARYL-COA]][c] '''+''' 2 [[PROTON]][c] '''+''' 2 [[NADPH]][c]
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* [[CDPDIGLYSYN-RXN]]
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* With common name(s):
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** 5 associated gene(s):
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** 1 (R)-mevalonate[c] '''+''' 2 NADP+[c] '''+''' 1 coenzyme A[c] '''<=>''' 1 (S)-3-hydroxy-3-methylglutaryl-CoA[c] '''+''' 2 H+[c] '''+''' 2 NADPH[c]
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*** [[CHC_T00001603001_1]]
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*** [[CHC_T00009577001]]
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== Genes associated with this reaction  ==
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*** [[CHC_T00009577001_1]]
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== Pathways  ==
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*** [[CHC_T00010117001]]
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* [[PWY-922]], mevalonate pathway I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-922 PWY-922]
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*** [[CHC_T00010117001_1]]
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** '''7''' reactions found over '''7''' reactions in the full pathway
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** 3 reconstruction source(s) associated:
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* [[PWY-6174]], mevalonate pathway II (archaea): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6174 PWY-6174]
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*** [[annotation-original_genome]]
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** '''7''' reactions found over '''7''' reactions in the full pathway
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*** [[orthology-ectocarpus_siliculosus]]
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* [[PWY-7391]], isoprene biosynthesis II (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7391 PWY-7391]
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*** [[orthology-galdieria.sulphuraria]]
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** '''7''' reactions found over '''8''' reactions in the full pathway
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* [[DIACYLGLYKIN-RXN]]
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* [[PWY-7524]], mevalonate pathway III (archaea): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7524 PWY-7524]
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** 1 associated gene(s):
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** '''5''' reactions found over '''8''' reactions in the full pathway
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*** [[CHC_T00008540001_1]]
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== Reconstruction information  ==
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** 2 reconstruction source(s) associated:
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* [[gap-filling]]:
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*** [[orthology-ectocarpus_siliculosus]]
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** [[meneco]]:
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*** [[orthology-galdieria.sulphuraria]]
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*** [[added for gapfilling]]
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* [[GLUC1PURIDYLTRANS-RXN]]
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** 4 associated gene(s):
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*** [[CHC_T00008779001_1]]
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*** [[CHC_T00009281001]]
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*** [[CHC_T00002564001_1]]
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*** [[CHC_T00009281001_1]]
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** 4 reconstruction source(s) associated:
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*** [[annotation-original_genome]]
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*** [[orthology-arabidopsis_thaliana]]
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*** [[orthology-ectocarpus_siliculosus]]
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*** [[orthology-galdieria.sulphuraria]]
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* [[PHOSPHAGLYPSYN-RXN]]
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** 4 associated gene(s):
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*** [[CHC_T00008428001]]
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*** [[CHC_T00009507001_1]]
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*** [[CHC_T00009507001]]
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*** [[CHC_T00008428001_1]]
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** 4 reconstruction source(s) associated:
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*** [[annotation-original_genome]]
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*** [[orthology-arabidopsis_thaliana]]
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*** [[orthology-ectocarpus_siliculosus]]
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*** [[orthology-galdieria.sulphuraria]]
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* [[RXN-15117]]
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** 7 associated gene(s):
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*** [[CHC_T00009283001_1]]
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*** [[CHC_T00008565001_1]]
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*** [[CHC_T00009383001_1]]
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*** [[CHC_T00010015001_1]]
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*** [[CHC_T00007099001_1]]
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*** [[CHC_T00003861001_1]]
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*** [[CHC_T00000791001_1]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-arabidopsis_thaliana]]
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*** [[orthology-ectocarpus_siliculosus]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=PGPPHOSPHA-RXN PGPPHOSPHA-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16648 RXN-16648]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-18013 RXN-18013]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-18014 RXN-18014]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-18035 RXN-18035]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-18036 RXN-18036]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-18037 RXN-18037]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-18038 RXN-18038]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-18039 RXN-18039]
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* [http://metacyc.org/META/NEW-IMAGE?object=TRANS-RXN-315 TRANS-RXN-315]
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* [http://metacyc.org/META/NEW-IMAGE?object=TRANS-RXN-316 TRANS-RXN-316]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: taxonomic range=TAX-1239}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15989 15989]
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{{#set: common name=type I lipoteichoic acid biosynthesis (S. aureus)}}
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* LIGAND-RXN:
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{{#set: reaction found=5}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02082 R02082]
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{{#set: total reaction=16}}
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* UNIPROT:
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{{#set: completion rate=31.0}}
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** [http://www.uniprot.org/uniprot/P16393 P16393]
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** [http://www.uniprot.org/uniprot/P14891 P14891]
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** [http://www.uniprot.org/uniprot/P16237 P16237]
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** [http://www.uniprot.org/uniprot/P20715 P20715]
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** [http://www.uniprot.org/uniprot/Q59468 Q59468]
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** [http://www.uniprot.org/uniprot/Q01237 Q01237]
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** [http://www.uniprot.org/uniprot/Q61671 Q61671]
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** [http://www.uniprot.org/uniprot/Q944T9 Q944T9]
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** [http://www.uniprot.org/uniprot/Q9S9C2 Q9S9C2]
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** [http://www.uniprot.org/uniprot/Q9S999 Q9S999]
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** [http://www.uniprot.org/uniprot/Q9S998 Q9S998]
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** [http://www.uniprot.org/uniprot/Q9S997 Q9S997]
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** [http://www.uniprot.org/uniprot/P04035 P04035]
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** [http://www.uniprot.org/uniprot/P00347 P00347]
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** [http://www.uniprot.org/uniprot/P29058 P29058]
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** [http://www.uniprot.org/uniprot/P29057 P29057]
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** [http://www.uniprot.org/uniprot/Q12577 Q12577]
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** [http://www.uniprot.org/uniprot/Q12649 Q12649]
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** [http://www.uniprot.org/uniprot/Q00583 Q00583]
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** [http://www.uniprot.org/uniprot/Q01559 Q01559]
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** [http://www.uniprot.org/uniprot/P48022 P48022]
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** [http://www.uniprot.org/uniprot/Q43825 Q43825]
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** [http://www.uniprot.org/uniprot/Q43826 Q43826]
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** [http://www.uniprot.org/uniprot/P14773 P14773]
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** [http://www.uniprot.org/uniprot/Q7M4W2 Q7M4W2]
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** [http://www.uniprot.org/uniprot/Q7M4W1 Q7M4W1]
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** [http://www.uniprot.org/uniprot/Q7M4W4 Q7M4W4]
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** [http://www.uniprot.org/uniprot/Q7M4W3 Q7M4W3]
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** [http://www.uniprot.org/uniprot/P48019 P48019]
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** [http://www.uniprot.org/uniprot/Q41454 Q41454]
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** [http://www.uniprot.org/uniprot/Q42506 Q42506]
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** [http://www.uniprot.org/uniprot/Q41455 Q41455]
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** [http://www.uniprot.org/uniprot/Q41456 Q41456]
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** [http://www.uniprot.org/uniprot/Q41458 Q41458]
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** [http://www.uniprot.org/uniprot/P48020 P48020]
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** [http://www.uniprot.org/uniprot/Q9FS01 Q9FS01]
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** [http://www.uniprot.org/uniprot/Q42466 Q42466]
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** [http://www.uniprot.org/uniprot/O48624 O48624]
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** [http://www.uniprot.org/uniprot/O04188 O04188]
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** [http://www.uniprot.org/uniprot/O24594 O24594]
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** [http://www.uniprot.org/uniprot/Q41438 Q41438]
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** [http://www.uniprot.org/uniprot/O64966 O64966]
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** [http://www.uniprot.org/uniprot/O64967 O64967]
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** [http://www.uniprot.org/uniprot/Q03163 Q03163]
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** [http://www.uniprot.org/uniprot/Q39628 Q39628]
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** [http://www.uniprot.org/uniprot/P93514 P93514]
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** [http://www.uniprot.org/uniprot/O08424 O08424]
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{{#set: direction=REVERSIBLE}}
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{{#set: ec number=EC-1.1.1.34}}
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{{#set: in pathway=PWY-922|PWY-6174|PWY-7391|PWY-7524}}
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{{#set: reconstruction category=gap-filling}}
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{{#set: reconstruction tool=meneco}}
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{{#set: reconstruction source=added for gapfilling}}
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Revision as of 16:04, 23 May 2018

Pathway PWY-7817

  • taxonomic range:
  • common name:
    • type I lipoteichoic acid biosynthesis (S. aureus)
  • Synonym(s):

Reaction(s) found

5 reactions found over 16 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=PWY-7817&oldid=16080"