Difference between revisions of "6.2.1.34-RXN"

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(Created page with "Category:Gene == Gene CHC_T00009019001 == * left end position: ** 97869 * transcription direction: ** POSITIVE * right end position: ** 99044 * centisome position: ** 45.7...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=6.2.1.34-RXN 6.2.1.34-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.o...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene CHC_T00009019001 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=6.2.1.34-RXN 6.2.1.34-RXN] ==
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* left end position:
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* direction:
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** 97869
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** LEFT-TO-RIGHT
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* transcription direction:
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* ec number:
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** POSITIVE
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** [http://enzyme.expasy.org/EC/6.2.1.34 EC-6.2.1.34]
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* right end position:
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** 99044
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* centisome position:
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** 45.70349   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[2.1.1.79-RXN]]
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* With identifiers:
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** original_genome
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** 1 [[FERULIC-ACID]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[FERULOYL-COA]][c]
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***automated-name-match
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* With common name(s):
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* [[RXN-7421]]
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** 1 ferulate[c] '''+''' 1 ATP[c] '''+''' 1 coenzyme A[c] '''=>''' 1 AMP[c] '''+''' 1 diphosphate[c] '''+''' 1 feruloyl-CoA[c]
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** original_genome
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***automated-name-match
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== Genes associated with this reaction  ==
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* [[RXN1G-2544]]
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Genes have been associated with this reaction based on different elements listed below.
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** original_genome
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* Gene: [[CHC_T00008472001_1]]
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***automated-name-match
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** Source: [[orthology-arabidopsis_thaliana]]
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* [[RXN1G-3641]]
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* Gene: [[CHC_T00008160001_1]]
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** original_genome
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** Source: [[orthology-ectocarpus_siliculosus]]
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***automated-name-match
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** Source: [[orthology-arabidopsis_thaliana]]
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== Pathways associated ==
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== Pathways  ==
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* [[PWY-4942]]
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* [[PWY-6343]], ferulate degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6343 PWY-6343]
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* [[PWY0-541]]
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** '''1''' reactions found over '''3''' reactions in the full pathway
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* [[PWYG-321]]
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* [[PWY-1121]], suberin monomers biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-1121 PWY-1121]
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** '''8''' reactions found over '''19''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-arabidopsis_thaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=97869}}
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* LIGAND-RXN:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02194 R02194]
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{{#set: right end position=99044}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: centisome position=45.70349    }}
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{{#set: ec number=EC-6.2.1.34}}
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{{#set: reaction associated=2.1.1.79-RXN|RXN-7421|RXN1G-2544|RXN1G-3641}}
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{{#set: gene associated=CHC_T00008472001_1|CHC_T00008160001_1}}
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{{#set: pathway associated=PWY-4942|PWY0-541|PWYG-321}}
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{{#set: in pathway=PWY-6343|PWY-1121}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus}}
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{{#set: reconstruction tool=pantograph}}

Revision as of 16:07, 23 May 2018

Reaction 6.2.1.34-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ferulate[c] + 1 ATP[c] + 1 coenzyme A[c] => 1 AMP[c] + 1 diphosphate[c] + 1 feruloyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6343, ferulate degradation: PWY-6343
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-1121, suberin monomers biosynthesis: PWY-1121
    • 8 reactions found over 19 reactions in the full pathway

Reconstruction information

External links




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