Difference between revisions of "SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7706 RXN-7706] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/1....")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN] == * direction: ** L...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7706 RXN-7706] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* common name:
 +
** succinate dehydrogenase (Complex II) flavoprotein subunit precursor
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.1.1.1 EC-1.1.1.1]
+
** [http://enzyme.expasy.org/EC/1.3.5.1 EC-1.3.5.1]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CPD-7036]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[NADH]][c] '''=>''' 1 [[CPD-7037]][c] '''+''' 1 [[NAD]][c]
+
** 1 [[Ubiquinones]][c] '''+''' 1 [[SUC]][c] '''=>''' 1 [[Ubiquinols]][c] '''+''' 1 [[FUM]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 3-methylthiopropanal[c] '''+''' 1 H+[c] '''+''' 1 NADH[c] '''=>''' 1 methionol[c] '''+''' 1 NAD+[c]
+
** 1 a ubiquinone[c] '''+''' 1 succinate[c] '''=>''' 1 an ubiquinol[c] '''+''' 1 fumarate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[CHC_T00010066001_1]]
+
* Gene: [[CHC_T00007584001_1]]
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
** Source: [[orthology-galdieria.sulphuraria]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[CHC_T00008943001_1]]
 +
** Source: [[orthology-galdieria.sulphuraria]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[CHC_T00007286001_1]]
 +
** Source: [[orthology-galdieria.sulphuraria]]
 +
* Gene: [[CHC_T00008943001]]
 +
** Source: [[annotation-original_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[CHC_T00006990001_1]]
 +
** Source: [[orthology-galdieria.sulphuraria]]
 +
* Gene: [[CHC_T00001817001_1]]
 +
** Source: [[orthology-galdieria.sulphuraria]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5082]], L-methionine degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5082 PWY-5082]
+
* [[PWY0-1353]], succinate to cytochrome bd oxidase electron transfer: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1353 PWY0-1353]
−
** '''1''' reactions found over '''3''' reactions in the full pathway
+
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-3781]], aerobic respiration I (cytochrome c): [http://metacyc.org/META/NEW-IMAGE?object=PWY-3781 PWY-3781]
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-7279]], aerobic respiration II (cytochrome c) (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7279 PWY-7279]
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY0-1329]], succinate to cytochrome bo oxidase electron transfer: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1329 PWY0-1329]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-4302]], aerobic respiration III (alternative oxidase pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY-4302 PWY-4302]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY66-398]], TCA cycle III (animals): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-398 PWY66-398]
 +
** '''11''' reactions found over '''11''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-ectocarpus_siliculosus]]
−
*** [[galdieria.sulphuraria]]
+
*** Tool: [[pantograph]]
 +
** Source: [[orthology-galdieria.sulphuraria]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-original_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13713 13713]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R02164 R02164]
 +
* PIR:
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T50081 T50081]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T46878 T46878]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T41753 T41753]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T37633 T37633]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T11245 T11245]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T11229 T11229]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T11218 T11218]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S78180 S78180]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S78179 S78179]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S78178 S78178]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S74810 S74810]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S62756 S62756]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S62755 S62755]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S59115 S59115]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S59114 S59114]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S56817 S56817]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S34793 S34793]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S26978 S26978]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S25968 S25968]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=RDBYIS RDBYIS]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=PT0094 PT0094]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=JX0336 JX0336]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=I38895 I38895]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=D81388 D81388]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=D71712 D71712]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=D32394 D32394]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=C32394 C32394]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=B58930 B58930]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=B32394 B32394]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A56660 A56660]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A45159 A45159]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A42792 A42792]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P35720 P35720]
 +
** [http://www.uniprot.org/uniprot/Q26266 Q26266]
 +
** [http://www.uniprot.org/uniprot/P21913 P21913]
 +
** [http://www.uniprot.org/uniprot/Q9ZZR2 Q9ZZR2]
 +
** [http://www.uniprot.org/uniprot/P21911 P21911]
 +
** [http://www.uniprot.org/uniprot/Q9ZEA1 Q9ZEA1]
 +
** [http://www.uniprot.org/uniprot/Q9PI67 Q9PI67]
 +
** [http://www.uniprot.org/uniprot/P21912 P21912]
 +
** [http://www.uniprot.org/uniprot/P31040 P31040]
 +
** [http://www.uniprot.org/uniprot/Q9CQA3 Q9CQA3]
 +
** [http://www.uniprot.org/uniprot/P21801 P21801]
 +
** [http://www.uniprot.org/uniprot/P35721 P35721]
 +
** [http://www.uniprot.org/uniprot/P32420 P32420]
 +
** [http://www.uniprot.org/uniprot/Q00711 Q00711]
 +
** [http://www.uniprot.org/uniprot/P47052 P47052]
 +
** [http://www.uniprot.org/uniprot/P48932 P48932]
 +
** [http://www.uniprot.org/uniprot/P48934 P48934]
 +
** [http://www.uniprot.org/uniprot/P48935 P48935]
 +
** [http://www.uniprot.org/uniprot/P48933 P48933]
 +
** [http://www.uniprot.org/uniprot/P73723 P73723]
 +
** [http://www.uniprot.org/uniprot/P80481 P80481]
 +
** [http://www.uniprot.org/uniprot/P80482 P80482]
 +
** [http://www.uniprot.org/uniprot/P80480 P80480]
 +
** [http://www.uniprot.org/uniprot/Q9T584 Q9T584]
 +
** [http://www.uniprot.org/uniprot/P80479 P80479]
 +
** [http://www.uniprot.org/uniprot/P80478 P80478]
 +
** [http://www.uniprot.org/uniprot/Q09508 Q09508]
 +
** [http://www.uniprot.org/uniprot/Q59659 Q59659]
 +
** [http://www.uniprot.org/uniprot/Q9UTJ7 Q9UTJ7]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-1.1.1.1}}
+
{{#set: common name=succinate dehydrogenase (Complex II) flavoprotein subunit precursor}}
−
{{#set: gene associated=CHC_T00010066001_1}}
+
{{#set: ec number=EC-1.3.5.1}}
−
{{#set: in pathway=PWY-5082}}
+
{{#set: gene associated=CHC_T00007584001_1|CHC_T00008943001_1|CHC_T00007286001_1|CHC_T00008943001|CHC_T00006990001_1|CHC_T00001817001_1}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: in pathway=PWY0-1353|PWY-3781|PWY-7279|PWY0-1329|PWY-4302|PWY66-398}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction source=galdieria.sulphuraria}}
+
{{#set: reconstruction source=annotation-original_genome|orthology-ectocarpus_siliculosus|orthology-galdieria.sulphuraria}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 16:13, 23 May 2018

Reaction SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • succinate dehydrogenase (Complex II) flavoprotein subunit precursor
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 a ubiquinone[c] + 1 succinate[c] => 1 an ubiquinol[c] + 1 fumarate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY0-1353, succinate to cytochrome bd oxidase electron transfer: PWY0-1353
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-3781, aerobic respiration I (cytochrome c): PWY-3781
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-7279, aerobic respiration II (cytochrome c) (yeast): PWY-7279
    • 4 reactions found over 4 reactions in the full pathway
  • PWY0-1329, succinate to cytochrome bo oxidase electron transfer: PWY0-1329
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-4302, aerobic respiration III (alternative oxidase pathway): PWY-4302
    • 3 reactions found over 3 reactions in the full pathway
  • PWY66-398, TCA cycle III (animals): PWY66-398
    • 11 reactions found over 11 reactions in the full pathway

Reconstruction information

External links





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