Difference between revisions of "RXN-12440"
From metabolic_network
(Created page with "Category:Gene == Gene CHC_T00008496001 == * left end position: ** 185916 * transcription direction: ** POSITIVE * right end position: ** 186599 * centisome position: ** 61...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12440 RXN-12440] == * direction: ** LEFT-TO-RIGHT * common name: ** Ascorbate Peroxidase, APX2...") |
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− | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12440 RXN-12440] == |
− | * | + | * direction: |
− | ** | + | ** LEFT-TO-RIGHT |
− | * | + | * common name: |
− | ** | + | ** Ascorbate Peroxidase, APX2 |
− | + | ** Ascorbate Peroxidase, APX1 | |
− | ** | + | * ec number: |
− | * | + | ** [http://enzyme.expasy.org/EC/1.11.1.11 EC-1.11.1.11] |
− | ** | + | |
* Synonym(s): | * Synonym(s): | ||
− | == | + | == Reaction Formula == |
− | * | + | * With identifiers: |
− | ** | + | ** 1 [[PROTON]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 2 [[ASCORBATE]][c] '''=>''' 2 [[WATER]][c] '''+''' 1 [[L-DEHYDRO-ASCORBATE]][c] '''+''' 1 [[ASCORBATE]][c] |
− | + | * With common name(s): | |
− | + | ** 1 H+[c] '''+''' 1 hydrogen peroxide[c] '''+''' 2 L-ascorbate[c] '''=>''' 2 H2O[c] '''+''' 1 L-dehydro-ascorbate[c] '''+''' 1 L-ascorbate[c] | |
− | + | ||
− | + | == Genes associated with this reaction == | |
− | + | Genes have been associated with this reaction based on different elements listed below. | |
− | + | * Gene: [[CHC_T00008640001_1]] | |
− | + | ** Source: [[orthology-galdieria.sulphuraria]] | |
− | + | ** Source: [[orthology-ectocarpus_siliculosus]] | |
− | + | * Gene: [[CHC_T00010024001_1]] | |
− | + | ** Source: [[orthology-ectocarpus_siliculosus]] | |
− | + | * Gene: [[CHC_T00010024001]] | |
− | + | ** Source: [[annotation-original_genome]] | |
− | + | *** Assignment: AUTOMATED-NAME-MATCH | |
− | + | * Gene: [[CHC_T00008640001]] | |
− | + | ** Source: [[annotation-original_genome]] | |
− | + | *** Assignment: AUTOMATED-NAME-MATCH | |
− | + | == Pathways == | |
− | + | * [[PWY-6960]], L-ascorbate degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6960 PWY-6960] | |
− | + | ** '''1''' reactions found over '''6''' reactions in the full pathway | |
− | + | * [[PWY-6959]], L-ascorbate degradation V: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6959 PWY-6959] | |
− | + | ** '''1''' reactions found over '''5''' reactions in the full pathway | |
− | + | * [[PWY-6961]], L-ascorbate degradation II (bacterial, aerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6961 PWY-6961] | |
− | + | ** '''1''' reactions found over '''8''' reactions in the full pathway | |
− | + | == Reconstruction information == | |
− | + | * Category: [[orthology]] | |
− | + | ** Source: [[orthology-ectocarpus_siliculosus]] | |
− | + | *** Tool: [[pantograph]] | |
− | + | ** Source: [[orthology-galdieria.sulphuraria]] | |
− | + | *** Tool: [[pantograph]] | |
− | + | * Category: [[annotation]] | |
− | + | ** Source: [[annotation-original_genome]] | |
− | + | *** Tool: [[pathwaytools]] | |
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== External links == | == External links == | ||
− | {{#set: | + | {{#set: direction=LEFT-TO-RIGHT}} |
− | {{#set: | + | {{#set: common name=Ascorbate Peroxidase, APX2}} |
− | {{#set: | + | {{#set: common name=Ascorbate Peroxidase, APX1}} |
− | {{#set: | + | {{#set: ec number=EC-1.11.1.11}} |
− | {{#set: | + | {{#set: gene associated=CHC_T00008640001_1|CHC_T00010024001_1|CHC_T00010024001|CHC_T00008640001}} |
− | {{#set: pathway | + | {{#set: in pathway=PWY-6960|PWY-6959|PWY-6961}} |
+ | {{#set: reconstruction category=orthology|annotation}} | ||
+ | {{#set: reconstruction source=annotation-original_genome|orthology-ectocarpus_siliculosus|orthology-galdieria.sulphuraria}} | ||
+ | {{#set: reconstruction tool=pantograph|pathwaytools}} |
Revision as of 17:16, 23 May 2018
Contents
Reaction RXN-12440
- direction:
- LEFT-TO-RIGHT
- common name:
- Ascorbate Peroxidase, APX2
- Ascorbate Peroxidase, APX1
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 PROTON[c] + 1 HYDROGEN-PEROXIDE[c] + 2 ASCORBATE[c] => 2 WATER[c] + 1 L-DEHYDRO-ASCORBATE[c] + 1 ASCORBATE[c]
- With common name(s):
- 1 H+[c] + 1 hydrogen peroxide[c] + 2 L-ascorbate[c] => 2 H2O[c] + 1 L-dehydro-ascorbate[c] + 1 L-ascorbate[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: CHC_T00008640001_1
- Source: orthology-galdieria.sulphuraria
- Source: orthology-ectocarpus_siliculosus
- Gene: CHC_T00010024001_1
- Source: orthology-ectocarpus_siliculosus
- Gene: CHC_T00010024001
- Source: annotation-original_genome
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-original_genome
- Gene: CHC_T00008640001
- Source: annotation-original_genome
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-original_genome
Pathways
- PWY-6960, L-ascorbate degradation III: PWY-6960
- 1 reactions found over 6 reactions in the full pathway
- PWY-6959, L-ascorbate degradation V: PWY-6959
- 1 reactions found over 5 reactions in the full pathway
- PWY-6961, L-ascorbate degradation II (bacterial, aerobic): PWY-6961
- 1 reactions found over 8 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-galdieria.sulphuraria
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Category: annotation
- Source: annotation-original_genome
- Tool: pathwaytools
- Source: annotation-original_genome