Difference between revisions of "RXN-13724"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-161 RXN-161] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.expasy.org/EC/1.1.1 E...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13724 RXN-13724] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-161 RXN-161] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13724 RXN-13724] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.1.1 EC-1.1.1]
+
** [http://enzyme.expasy.org/EC/1.3.1.96 EC-1.3.1.96]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[BUTANOL]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[NADH]][c] '''+''' 1 [[BUTANAL]][c] '''+''' 1 [[PROTON]][c]
+
** 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CPD-465]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[SQUALENE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 butan-1-ol[c] '''+''' 1 NAD+[c] '''<=>''' 1 NADH[c] '''+''' 1 butan-1-al[c] '''+''' 1 H+[c]
+
** 1 NADPH[c] '''+''' 1 H+[c] '''+''' 1 presqualene diphosphate[c] '''=>''' 1 NADP+[c] '''+''' 1 diphosphate[c] '''+''' 1 squalene[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[CHC_T00001581001_1]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
** Source: [[orthology-arabidopsis_thaliana]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6583]], pyruvate fermentation to butanol I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6583 PWY-6583]
+
* [[PWY-6105]], botryococcenes and methylated squalene biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6105 PWY-6105]
−
** '''5''' reactions found over '''8''' reactions in the full pathway
+
** '''2''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-7396]], butanol and isobutanol biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7396 PWY-7396]
+
−
** '''4''' reactions found over '''8''' reactions in the full pathway
+
−
* [[PWY-6883]], pyruvate fermentation to butanol II (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6883 PWY-6883]
+
−
** '''5''' reactions found over '''6''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[gap-filling]]:
+
* Category: [[orthology]]
−
** [[meneco]]:
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** Source: [[orthology-arabidopsis_thaliana]]
−
*** [[added for gapfilling]]
+
*** Tool: [[pantograph]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=33199 33199]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22233 22233]
−
* LIGAND-RXN:
+
{{#set: direction=LEFT-TO-RIGHT}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R03544 R03544]
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{{#set: ec number=EC-1.3.1.96}}
−
{{#set: direction=REVERSIBLE}}
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{{#set: gene associated=CHC_T00001581001_1}}
−
{{#set: ec number=EC-1.1.1}}
+
{{#set: in pathway=PWY-6105}}
−
{{#set: in pathway=PWY-6583|PWY-7396|PWY-6883}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction category=gap-filling}}
+
{{#set: reconstruction source=orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus}}
−
{{#set: reconstruction tool=meneco}}
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=added for gapfilling}}
+

Latest revision as of 17:17, 23 May 2018

Reaction RXN-13724

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 NADPH[c] + 1 H+[c] + 1 presqualene diphosphate[c] => 1 NADP+[c] + 1 diphosphate[c] + 1 squalene[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6105, botryococcenes and methylated squalene biosynthesis: PWY-6105
    • 2 reactions found over 9 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=RXN-13724&oldid=16720"