Difference between revisions of "RXN66-316"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RIBOFLAVINKIN-RXN RIBOFLAVINKIN-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzym...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-316 RXN66-316] == * direction: ** LEFT-TO-RIGHT * common name: ** 4α-hydroxymethyl-5&al...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RIBOFLAVINKIN-RXN RIBOFLAVINKIN-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-316 RXN66-316] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* ec number:
+
* common name:
−
** [http://enzyme.expasy.org/EC/2.7.1.26 EC-2.7.1.26]
+
** 4α-hydroxymethyl-5α-cholesta-8,24-dien-3β-ol dehydrogenase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[ATP]][c] '''+''' 1 [[RIBOFLAVIN]][c] '''=>''' 1 [[FMN]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[ADP]][c]
+
** 1 [[CPD-4579]][c] '''+''' 1 [[NADH-P-OR-NOP]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CPD-4580]][c] '''+''' 1 [[NAD-P-OR-NOP]][c] '''+''' 2 [[WATER]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 ATP[c] '''+''' 1 riboflavin[c] '''=>''' 1 FMN[c] '''+''' 1 H+[c] '''+''' 1 ADP[c]
+
** 1 4α-hydroxymethyl-5α-cholesta-8,24-dien-3β-ol[c] '''+''' 1 NAD(P)H[c] '''+''' 1 oxygen[c] '''+''' 1 H+[c] '''=>''' 1 4α-formyl-5α-cholesta-8,24-dien-3β-ol[c] '''+''' 1 NAD(P)+[c] '''+''' 2 H2O[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[CHC_T00009043001_1]]
+
* Gene: [[CHC_T00010320001_1]]
−
** [[pantograph]]-[[a.taliana]]
+
** Source: [[orthology-galdieria.sulphuraria]]
−
* [[CHC_T00002338001_1]]
+
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY66-366]], flavin biosynthesis IV (mammalian): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-366 PWY66-366]
+
* [[PWY66-341]], cholesterol biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-341 PWY66-341]
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''15''' reactions found over '''22''' reactions in the full pathway
−
* [[PWY-6168]], flavin biosynthesis III (fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6168 PWY-6168]
+
* [[PWY-6074]], zymosterol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6074 PWY-6074]
−
** '''6''' reactions found over '''9''' reactions in the full pathway
+
** '''10''' reactions found over '''12''' reactions in the full pathway
−
* [[RIBOSYN2-PWY]], flavin biosynthesis I (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=RIBOSYN2-PWY RIBOSYN2-PWY]
+
* [[PWY66-4]], cholesterol biosynthesis III (via desmosterol): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-4 PWY66-4]
−
** '''8''' reactions found over '''9''' reactions in the full pathway
+
** '''16''' reactions found over '''22''' reactions in the full pathway
−
* [[PWY-5523]], 5,6-dimethylbenzimidazole biosynthesis I (aerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5523 PWY-5523]
+
−
** '''1''' reactions found over '''3''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-galdieria.sulphuraria]]
−
*** [[galdieria.sulphuraria]]
+
*** Tool: [[pantograph]]
−
*** [[a.taliana]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14357 14357]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R00549 R00549]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/Q9JVY5 Q9JVY5]
 
−
** [http://www.uniprot.org/uniprot/Q9PHS7 Q9PHS7]
 
−
** [http://www.uniprot.org/uniprot/Q59263 Q59263]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-2.7.1.26}}
+
{{#set: common name=4α-hydroxymethyl-5α-cholesta-8,24-dien-3β-ol dehydrogenase}}
−
{{#set: gene associated=CHC_T00009043001_1|CHC_T00002338001_1}}
+
{{#set: gene associated=CHC_T00010320001_1}}
−
{{#set: in pathway=PWY66-366|PWY-6168|RIBOSYN2-PWY|PWY-5523}}
+
{{#set: in pathway=PWY66-341|PWY-6074|PWY66-4}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-galdieria.sulphuraria}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=galdieria.sulphuraria|a.taliana}}
 

Revision as of 16:17, 23 May 2018

Reaction RXN66-316

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 4α-hydroxymethyl-5α-cholesta-8,24-dien-3β-ol dehydrogenase
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY66-341, cholesterol biosynthesis I: PWY66-341
    • 15 reactions found over 22 reactions in the full pathway
  • PWY-6074, zymosterol biosynthesis: PWY-6074
    • 10 reactions found over 12 reactions in the full pathway
  • PWY66-4, cholesterol biosynthesis III (via desmosterol): PWY66-4
    • 16 reactions found over 22 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=RXN66-316&oldid=16731"