Difference between revisions of "RXN-11480"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=FARNESYLTRANSTRANSFERASE-RXN FARNESYLTRANSTRANSFERASE-RXN] == * direction: ** LEFT-TO-RIGHT * ec nu...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11480 RXN-11480] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-oxoacyl-(acyl-carrier-pro...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=FARNESYLTRANSTRANSFERASE-RXN FARNESYLTRANSTRANSFERASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11480 RXN-11480] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* common name:
 +
** 3-oxoacyl-(acyl-carrier-protein) reductase
 +
** 3-oxoacyl-[acyl-carrier-protein] reductase
 +
** beta-ketoacyl reductase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.5.1.29 EC-2.5.1.29]
+
** [http://enzyme.expasy.org/EC/1.1.1.100 EC-1.1.1.100]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[FARNESYL-PP]][c] '''+''' 1 [[DELTA3-ISOPENTENYL-PP]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[GERANYLGERANYL-PP]][c]
+
** 1 [[NADPH]][c] '''+''' 1 [[3-Ketopimeloyl-ACP-methyl-esters]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[3-hydroxypimeloyl-ACP-methyl-esters]][c] '''+''' 1 [[NADP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 (2E,6E)-farnesyl diphosphate[c] '''+''' 1 isopentenyl diphosphate[c] '''=>''' 1 diphosphate[c] '''+''' 1 geranylgeranyl diphosphate[c]
+
** 1 NADPH[c] '''+''' 1 a 3-oxo-pimeloyl-[acp] methyl ester[c] '''+''' 1 H+[c] '''=>''' 1 a (3R)-3-hydroxypimeloyl-[acp] methyl ester[c] '''+''' 1 NADP+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[CHC_T00004833001_1]]
+
* Gene: [[CHC_T00008517001_1]]
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
** Source: [[orthology-galdieria.sulphuraria]]
−
* [[CHC_T00006851001_1]]
+
** Source: [[orthology-ectocarpus_siliculosus]]
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
* Gene: [[CHC_T00008477001]]
−
** [[pantograph]]-[[a.taliana]]
+
** Source: [[annotation-original_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[CHC_T00008496001]]
 +
** Source: [[annotation-original_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[CHC_T00008557001]]
 +
** Source: [[annotation-original_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7736]], stellatic acid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7736 PWY-7736]
+
* [[PWY-6519]], 8-amino-7-oxononanoate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6519 PWY-6519]
−
** '''3''' reactions found over '''8''' reactions in the full pathway
+
** '''7''' reactions found over '''11''' reactions in the full pathway
−
* [[PWY-7492]], paspaline biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7492 PWY-7492]
+
−
** '''1''' reactions found over '''6''' reactions in the full pathway
+
−
* [[PWY-6659]], fusicoccin A biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6659 PWY-6659]
+
−
** '''1''' reactions found over '''8''' reactions in the full pathway
+
−
* [[PWY-6691]], plaunotol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6691 PWY-6691]
+
−
** '''1''' reactions found over '''3''' reactions in the full pathway
+
−
* [[PWY-5120]], geranylgeranyl diphosphate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5120 PWY-5120]
+
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
−
* [[PWY-7720]], ophiobolin F biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7720 PWY-7720]
+
−
** '''1''' reactions found over '''3''' reactions in the full pathway
+
−
* [[PWY-7721]], methyl phomopsenoate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7721 PWY-7721]
+
−
** '''2''' reactions found over '''4''' reactions in the full pathway
+
−
* [[PWY-7517]], brassicicene C biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7517 PWY-7517]
+
−
** '''1''' reactions found over '''7''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-ectocarpus_siliculosus]]
−
*** [[galdieria.sulphuraria]]
+
*** Tool: [[pantograph]]
−
*** [[a.taliana]]
+
** Source: [[orthology-galdieria.sulphuraria]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-original_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17653 17653]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R02061 R02061]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P39464 P39464]
 
−
** [http://www.uniprot.org/uniprot/P24322 P24322]
 
−
** [http://www.uniprot.org/uniprot/P80042 P80042]
 
−
** [http://www.uniprot.org/uniprot/Q12051 Q12051]
 
−
** [http://www.uniprot.org/uniprot/P95999 P95999]
 
−
** [http://www.uniprot.org/uniprot/P48368 P48368]
 
−
** [http://www.uniprot.org/uniprot/P93227 P93227]
 
−
** [http://www.uniprot.org/uniprot/P93228 P93228]
 
−
** [http://www.uniprot.org/uniprot/Q42698 Q42698]
 
−
** [http://www.uniprot.org/uniprot/Q43133 Q43133]
 
−
** [http://www.uniprot.org/uniprot/Q42866 Q42866]
 
−
** [http://www.uniprot.org/uniprot/P54976 P54976]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-2.5.1.29}}
+
{{#set: common name=3-oxoacyl-(acyl-carrier-protein) reductase}}
−
{{#set: gene associated=CHC_T00004833001_1|CHC_T00006851001_1}}
+
{{#set: common name=3-oxoacyl-[acyl-carrier-protein] reductase}}
−
{{#set: in pathway=PWY-7736|PWY-7492|PWY-6659|PWY-6691|PWY-5120|PWY-7720|PWY-7721|PWY-7517}}
+
{{#set: common name=beta-ketoacyl reductase}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: ec number=EC-1.1.1.100}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: gene associated=CHC_T00008517001_1|CHC_T00008477001|CHC_T00008496001|CHC_T00008557001}}
−
{{#set: reconstruction source=galdieria.sulphuraria|a.taliana}}
+
{{#set: in pathway=PWY-6519}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-original_genome|orthology-ectocarpus_siliculosus|orthology-galdieria.sulphuraria}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 16:23, 23 May 2018

Reaction RXN-11480

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 3-oxoacyl-(acyl-carrier-protein) reductase
    • 3-oxoacyl-[acyl-carrier-protein] reductase
    • beta-ketoacyl reductase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6519, 8-amino-7-oxononanoate biosynthesis I: PWY-6519
    • 7 reactions found over 11 reactions in the full pathway

Reconstruction information

External links

"3-oxoacyl-[acyl-carrier-protein] reductase" cannot be used as a page name in this wiki.




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