Difference between revisions of "RXN-16135"

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(Created page with "Category:Gene == Gene CHC_T00009498001 == * left end position: ** 197207 * transcription direction: ** POSITIVE * right end position: ** 198241 * centisome position: ** 30...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16135 RXN-16135] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene CHC_T00009498001 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16135 RXN-16135] ==
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* left end position:
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* direction:
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** 197207
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** LEFT-TO-RIGHT
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* transcription direction:
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* ec number:
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** POSITIVE
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** [http://enzyme.expasy.org/EC/4.2.1.17 EC-4.2.1.17]
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* right end position:
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** 198241
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* centisome position:
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** 30.777237   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[UDPGLUCEPIM-RXN]]
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* With identifiers:
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** original_genome
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** 1 [[CPD-17386]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-17387]][c]
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***automated-name-match
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* With common name(s):
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== Pathways associated ==
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** 1 (2E,6Z,9Z,12Z,15Z,18Z,21Z)-tetracosaheptaenoyl-CoA[c] '''+''' 1 H2O[c] '''=>''' 1 (3S)-hydroxy-(6Z,9Z,12Z,15Z,18Z,21Z)-tetracosahexaenoyl-CoA[c]
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* [[PWY-7344]]
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* [[PWY-6397]]
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== Genes associated with this reaction  ==
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* [[COLANSYN-PWY]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[PWY-6527]]
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* Gene: [[CHC_T00009349001_1]]
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* [[PWY-7328]]
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** Source: [[orthology-galdieria.sulphuraria]]
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* [[PWY-6317]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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* [[PWY66-422]]
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* Gene: [[CHC_T00009110001_1]]
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* [[PWY-3821]]
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** Source: [[orthology-galdieria.sulphuraria]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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* Gene: [[CHC_T00009422001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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* Gene: [[CHC_T00009190001_1]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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== Pathways  ==
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* [[PWY-7606]], docosahexaenoate biosynthesis III (6-desaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7606 PWY-7606]
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** '''7''' reactions found over '''14''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-galdieria.sulphuraria]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=197207}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: ec number=EC-4.2.1.17}}
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{{#set: right end position=198241}}
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{{#set: gene associated=CHC_T00009349001_1|CHC_T00009110001_1|CHC_T00009422001_1|CHC_T00009190001_1}}
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{{#set: centisome position=30.777237    }}
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{{#set: in pathway=PWY-7606}}
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{{#set: reaction associated=UDPGLUCEPIM-RXN}}
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{{#set: reconstruction category=orthology}}
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{{#set: pathway associated=PWY-7344|PWY-6397|COLANSYN-PWY|PWY-6527|PWY-7328|PWY-6317|PWY66-422|PWY-3821}}
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{{#set: reconstruction source=orthology-ectocarpus_siliculosus|orthology-galdieria.sulphuraria}}
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{{#set: reconstruction tool=pantograph}}

Revision as of 16:24, 23 May 2018

Reaction RXN-16135

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 (2E,6Z,9Z,12Z,15Z,18Z,21Z)-tetracosaheptaenoyl-CoA[c] + 1 H2O[c] => 1 (3S)-hydroxy-(6Z,9Z,12Z,15Z,18Z,21Z)-tetracosahexaenoyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7606, docosahexaenoate biosynthesis III (6-desaturase, mammals): PWY-7606
    • 7 reactions found over 14 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=RXN-16135&oldid=17007"