Difference between revisions of "RXN-16616"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=tRNA-Containing-5MeAminoMe-2-ThioU tRNA-Containing-5MeAminoMe-2-ThioU] == * common name: ** a 5...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16616 RXN-16616] == * direction: ** LEFT-TO-RIGHT * common name: ** beta-ketoacyl reductase **...")
Line 1: Line 1:
−
[[Category:Metabolite]]
+
[[Category:Reaction]]
−
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=tRNA-Containing-5MeAminoMe-2-ThioU tRNA-Containing-5MeAminoMe-2-ThioU] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16616 RXN-16616] ==
 +
* direction:
 +
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** a 5-methylaminomethyl-2-thiouridine in tRNA
+
** beta-ketoacyl reductase
 +
** 3-oxoacyl-[acyl-carrier-protein] reductase
 +
** 3-oxoacyl-(acyl-carrier-protein) reductase
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/1.1.1.100 EC-1.1.1.100]
 
* Synonym(s):
 
* Synonym(s):
−
** a 5-methylaminomethyl-2-thiouridylate in tRNA
 
  
−
== Reaction(s) known to consume the compound ==
+
== Reaction Formula ==
−
== Reaction(s) known to produce the compound ==
+
* With identifiers:
−
* [[RXN0-5144]]
+
** 1 [[NADPH]][c] '''+''' 1 [[5Z-3-oxo-tetradec-5-enoyl-ACPs]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[3R-5Z-3-hydroxy-tetradec-5-enoyl-ACPs]][c]
−
== Reaction(s) of unknown directionality ==
+
* With common name(s):
 +
** 1 NADPH[c] '''+''' 1 a (5Z)-3-oxo-tetradec-5-enoyl-[acp][c] '''+''' 1 H+[c] '''=>''' 1 NADP+[c] '''+''' 1 a (3R,5Z)-3-hydroxy-tetradec-5-enoyl-[acp][c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[CHC_T00008557001]]
 +
** Source: [[annotation-original_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[CHC_T00008517001_1]]
 +
** Source: [[orthology-galdieria.sulphuraria]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[CHC_T00008496001]]
 +
** Source: [[annotation-original_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[CHC_T00008477001]]
 +
** Source: [[annotation-original_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
== Pathways  ==
 +
* [[PWY-7664]], oleate biosynthesis IV (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7664 PWY-7664]
 +
** '''10''' reactions found over '''14''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-galdieria.sulphuraria]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-original_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: common name=a 5-methylaminomethyl-2-thiouridine in tRNA}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=a 5-methylaminomethyl-2-thiouridylate in tRNA}}
+
{{#set: common name=beta-ketoacyl reductase}}
−
{{#set: produced by=RXN0-5144}}
+
{{#set: common name=3-oxoacyl-[acyl-carrier-protein] reductase}}
 +
{{#set: common name=3-oxoacyl-(acyl-carrier-protein) reductase}}
 +
{{#set: ec number=EC-1.1.1.100}}
 +
{{#set: gene associated=CHC_T00008557001|CHC_T00008517001_1|CHC_T00008496001|CHC_T00008477001}}
 +
{{#set: in pathway=PWY-7664}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-original_genome|orthology-ectocarpus_siliculosus|orthology-galdieria.sulphuraria}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 16:31, 23 May 2018

Reaction RXN-16616

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • beta-ketoacyl reductase
    • 3-oxoacyl-[acyl-carrier-protein] reductase
    • 3-oxoacyl-(acyl-carrier-protein) reductase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7664, oleate biosynthesis IV (anaerobic): PWY-7664
    • 10 reactions found over 14 reactions in the full pathway

Reconstruction information

External links

"3-oxoacyl-[acyl-carrier-protein] reductase" cannot be used as a page name in this wiki.




Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=RXN-16616&oldid=17367"