|
|
| Line 1: |
Line 1: |
| − | [[Category:Reaction]] | + | [[Category:Gene]] |
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CDPREDUCT-RXN CDPREDUCT-RXN] == | + | == Gene CHC_T00008295001 == |
| − | * direction: | + | * left end position: |
| − | ** LEFT-TO-RIGHT | + | ** 1158 |
| − | * common name: | + | * transcription direction: |
| − | ** ribonucleoside-diphosphate reductase alpha chain | + | ** NEGATIVE |
| − | ** ribonucleoside-diphosphate reductase beta chain | + | * right end position: |
| − | * ec number: | + | ** 2642 |
| − | ** [http://enzyme.expasy.org/EC/1.17.4.1 EC-1.17.4.1] | + | * centisome position: |
| | + | ** 2.6407607 |
| | * Synonym(s): | | * Synonym(s): |
| | | | |
| − | == Reaction Formula == | + | == Reactions associated == |
| − | * With identifiers: | + | * Reaction: [[KANAMYCIN-KINASE-RXN]] |
| − | ** 1 [[Red-Thioredoxin]][c] '''+''' 1 [[CDP]][c] '''=>''' 1 [[Ox-Thioredoxin]][c] '''+''' 1 [[DCDP]][c] '''+''' 1 [[WATER]][c]
| + | ** Source: [[annotation-original_genome]] |
| − | * With common name(s): | + | *** Assignment: automated-name-match |
| − | ** 1 a reduced thioredoxin[c] '''+''' 1 CDP[c] '''=>''' 1 an oxidized thioredoxin[c] '''+''' 1 dCDP[c] '''+''' 1 H2O[c] | + | == Pathways associated == |
| − | | + | |
| − | == Genes associated with this reaction ==
| + | |
| − | Genes have been associated with this reaction based on different elements listed below.
| + | |
| − | * [[CHC_T00008926001_1]]
| + | |
| − | ** [[pantograph]]-[[galdieria.sulphuraria]]
| + | |
| − | ** [[pantograph]]-[[a.taliana]]
| + | |
| − | * [[CHC_T00008864001_1]]
| + | |
| − | ** [[pantograph]]-[[galdieria.sulphuraria]]
| + | |
| − | ** [[pantograph]]-[[a.taliana]]
| + | |
| − | * [[CHC_T00008926001]]
| + | |
| − | ** ORIGINAL_GENOME
| + | |
| − | ***AUTOMATED-NAME-MATCH
| + | |
| − | * [[CHC_T00008864001]]
| + | |
| − | ** ORIGINAL_GENOME
| + | |
| − | ***AUTOMATED-NAME-MATCH
| + | |
| − | == Pathways ==
| + | |
| − | * [[PWY-7184]], pyrimidine deoxyribonucleotides de novo biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7184 PWY-7184]
| + | |
| − | ** '''9''' reactions found over '''9''' reactions in the full pathway
| + | |
| − | * [[PWY-7198]], pyrimidine deoxyribonucleotides de novo biosynthesis IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7198 PWY-7198]
| + | |
| − | ** '''6''' reactions found over '''7''' reactions in the full pathway | + | |
| − | * [[PWY-6545]], pyrimidine deoxyribonucleotides de novo biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6545 PWY-6545] | + | |
| − | ** '''8''' reactions found over '''9''' reactions in the full pathway
| + | |
| − | * [[PWY0-166]], superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli): [http://metacyc.org/META/NEW-IMAGE?object=PWY0-166 PWY0-166]
| + | |
| − | ** '''12''' reactions found over '''17''' reactions in the full pathway
| + | |
| − | * [[PWY-7210]], pyrimidine deoxyribonucleotides biosynthesis from CTP: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7210 PWY-7210]
| + | |
| − | ** '''8''' reactions found over '''8''' reactions in the full pathway
| + | |
| − | == Reconstruction information == | + | |
| − | * [[orthology]]:
| + | |
| − | ** [[pantograph]]:
| + | |
| − | *** [[galdieria.sulphuraria]]
| + | |
| − | *** [[a.taliana]]
| + | |
| − | * [[annotation]]:
| + | |
| − | ** [[pathwaytools]]:
| + | |
| − | *** [[original_genome]]
| + | |
| | == External links == | | == External links == |
| − | * RHEA:
| + | {{#set: left end position=1158}} |
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28038 28038]
| + | {{#set: transcription direction=NEGATIVE}} |
| − | * LIGAND-RXN:
| + | {{#set: right end position=2642}} |
| − | ** [http://www.genome.jp/dbget-bin/www_bget?R02024 R02024]
| + | {{#set: centisome position=2.6407607 }} |
| − | {{#set: direction=LEFT-TO-RIGHT}} | + | {{#set: reaction associated=KANAMYCIN-KINASE-RXN}} |
| − | {{#set: common name=ribonucleoside-diphosphate reductase alpha chain}} | + | |
| − | {{#set: common name=ribonucleoside-diphosphate reductase beta chain}} | + | |
| − | {{#set: ec number=EC-1.17.4.1}} | + | |
| − | {{#set: gene associated=CHC_T00008926001_1|CHC_T00008864001_1|CHC_T00008926001|CHC_T00008864001}} | + | |
| − | {{#set: in pathway=PWY-7184|PWY-7198|PWY-6545|PWY0-166|PWY-7210}}
| + | |
| − | {{#set: reconstruction category=orthology}}
| + | |
| − | {{#set: reconstruction tool=pantograph}}
| + | |
| − | {{#set: reconstruction source=galdieria.sulphuraria|a.taliana}}
| + | |
| − | {{#set: reconstruction category=annotation}}
| + | |
| − | {{#set: reconstruction tool=pathwaytools}}
| + | |
| − | {{#set: reconstruction source=original_genome}}
| + | |
