Difference between revisions of "CHC T00008547001 1"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5398 RXN0-5398] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.expasy.org/EC/4.2...")
 
(Created page with "Category:Gene == Gene CHC_T00008547001_1 == * Synonym(s): == Reactions associated == * Reaction: CYSTHIOCYS-RXN ** Source: orthology-ectocarpus_siliculosus * Reac...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5398 RXN0-5398] ==
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== Gene CHC_T00008547001_1 ==
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* direction:
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** REVERSIBLE
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* ec number:
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** [http://enzyme.expasy.org/EC/4.2.1.70 EC-4.2.1.70]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[CYSTHIOCYS-RXN]]
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** 1 [[URACIL]][c] '''+''' 1 [[CPD-15317]][c] '''<=>''' 1 [[WATER]][c] '''+''' 1 [[PSEUDOURIDINE-5-P]][c]
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** Source: [[orthology-ectocarpus_siliculosus]]
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* With common name(s):
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* Reaction: [[HOMOSERDEAM-RXN]]
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** 1 uracil[c] '''+''' 1 D-ribofuranose 5-phosphate[c] '''<=>''' 1 H2O[c] '''+''' 1 pseudouridine 5'-phosphate[c]
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** Source: [[orthology-ectocarpus_siliculosus]]
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* Reaction: [[LCYSDESULF-RXN]]
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== Genes associated with this reaction  ==
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** Source: [[orthology-ectocarpus_siliculosus]]
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[METBALT-RXN]]
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* [[CHC_T00001369001_1]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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** Source: [[orthology-arabidopsis_thaliana]]
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== Pathways  ==
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* Reaction: [[O-SUCCHOMOSERLYASE-RXN]]
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* [[PWY-6019]], pseudouridine degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6019 PWY-6019]
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** Source: [[orthology-galdieria.sulphuraria]]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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** Source: [[orthology-ectocarpus_siliculosus]]
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== Reconstruction information  ==
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** Source: [[orthology-arabidopsis_thaliana]]
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* [[orthology]]:
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* Reaction: [[RXN-14048]]
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** [[pantograph]]:
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** Source: [[orthology-ectocarpus_siliculosus]]
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*** [[galdieria.sulphuraria]]
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* Reaction: [[RXN-14049]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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* Reaction: [[RXN-15128]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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* Reaction: [[RXN-15129]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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* Reaction: [[RXN-15130]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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* Reaction: [[SULFOCYS-RXN]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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** Source: [[orthology-arabidopsis_thaliana]]
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== Pathways associated ==
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* [[HOMOCYSDEGR-PWY]]
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* [[HOMOSER-METSYN-PWY]]
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* [[LCYSDEG-PWY]]
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* [[PWY-801]]
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* [[PWY-I9]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: reaction associated=CYSTHIOCYS-RXN|HOMOSERDEAM-RXN|LCYSDESULF-RXN|METBALT-RXN|O-SUCCHOMOSERLYASE-RXN|RXN-14048|RXN-14049|RXN-15128|RXN-15129|RXN-15130|SULFOCYS-RXN}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18337 18337]
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{{#set: pathway associated=HOMOCYSDEGR-PWY|HOMOSER-METSYN-PWY|LCYSDEG-PWY|PWY-801|PWY-I9}}
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R01055 R01055]
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* UNIPROT:
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** [http://www.uniprot.org/uniprot/Q9JWF1 Q9JWF1]
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** [http://www.uniprot.org/uniprot/Q9JTX5 Q9JTX5]
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** [http://www.uniprot.org/uniprot/Q9PPJ9 Q9PPJ9]
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** [http://www.uniprot.org/uniprot/Q9CGH0 Q9CGH0]
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** [http://www.uniprot.org/uniprot/Q9CI80 Q9CI80]
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** [http://www.uniprot.org/uniprot/Q9JX44 Q9JX44]
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** [http://www.uniprot.org/uniprot/Q9V1A5 Q9V1A5]
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** [http://www.uniprot.org/uniprot/Q9PP96 Q9PP96]
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** [http://www.uniprot.org/uniprot/Q9PN18 Q9PN18]
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** [http://www.uniprot.org/uniprot/Q9PJ89 Q9PJ89]
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** [http://www.uniprot.org/uniprot/Q9PNJ2 Q9PNJ2]
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** [http://www.uniprot.org/uniprot/Q9PLW9 Q9PLW9]
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{{#set: direction=REVERSIBLE}}
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{{#set: ec number=EC-4.2.1.70}}
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{{#set: gene associated=CHC_T00001369001_1}}
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{{#set: in pathway=PWY-6019}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=galdieria.sulphuraria}}
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Revision as of 17:36, 23 May 2018

Gene CHC_T00008547001_1

  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=CHC_T00008547001_1&oldid=17602"