Difference between revisions of "RXN-14378"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-4261 RXN0-4261] == * direction: ** LEFT-TO-RIGHT * common name: ** ATP-dependent DNA helicase...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14378 RXN-14378] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-4261 RXN0-4261] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14378 RXN-14378] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
* common name:
+
* ec number:
** ATP-dependent DNA helicase RecQ putative
+
** [http://enzyme.expasy.org/EC/2.4.1.242 EC-2.4.1.242]
** RecQ helicase
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** ATP-dependent DNA helicase RecQ, MusN
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** ATP-dependent DNA helicase, RecQ family
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** ATP-dependent DNA helicase recQ
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** replicative DNA helicase subunit
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** ATP-dependent DNA helicase RecQ
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** ATP-dependent DNA helicase RecQ family protein
+
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1 [[WATER]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[Supercoiled-Duplex-DNAs]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[Single-Stranded-DNAs]][c]
+
** n [[1-4-alpha-D-Glucan]][c] '''+''' 1 [[ADP-D-GLUCOSE]][c] '''=>''' 1 [[ADP]][c] '''+''' n [[Alpha-Amyloses]][c]
 
* With common name(s):
 
* With common name(s):
** 1 H2O[c] '''+''' 1 ATP[c] '''+''' 1 a supercoiled duplex DNA[c] '''=>''' 1 phosphate[c] '''+''' 1 ADP[c] '''+''' 1 a single stranded DNA[c]
+
** n a 1,4-α-D-glucan[c] '''+''' 1 ADP-α-D-glucose[c] '''=>''' 1 ADP[c] '''+''' n α-amylose[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[CHC_T00010344001]]
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* Gene: [[CHC_T00009277001_1]]
** ORIGINAL_GENOME
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** Source: [[orthology-galdieria.sulphuraria]]
***AUTOMATED-NAME-MATCH
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* [[CHC_T00007861001_1]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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* [[CHC_T00009335001]]
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** ORIGINAL_GENOME
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***AUTOMATED-NAME-MATCH
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* [[CHC_T00008329001]]
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** ORIGINAL_GENOME
+
***AUTOMATED-NAME-MATCH
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* [[CHC_T00010333001]]
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** ORIGINAL_GENOME
+
***AUTOMATED-NAME-MATCH
+
* [[CHC_T00010224001_1]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
+
* [[CHC_T00009451001_1]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
+
* [[CHC_T00004400001_1]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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* [[CHC_T00008412001]]
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** ORIGINAL_GENOME
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***AUTOMATED-NAME-MATCH
+
* [[CHC_T00004316001_1]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
+
* [[CHC_T00009451001]]
+
** ORIGINAL_GENOME
+
***AUTOMATED-NAME-MATCH
+
* [[CHC_T00010230001]]
+
** ORIGINAL_GENOME
+
***AUTOMATED-NAME-MATCH
+
* [[CHC_T00008621001]]
+
** ORIGINAL_GENOME
+
***AUTOMATED-NAME-MATCH
+
* [[CHC_T00010224001]]
+
** ORIGINAL_GENOME
+
***AUTOMATED-NAME-MATCH
+
* [[CHC_T00010244001]]
+
** ORIGINAL_GENOME
+
***AUTOMATED-NAME-MATCH
+
* [[CHC_T00010105001]]
+
** ORIGINAL_GENOME
+
***AUTOMATED-NAME-MATCH
+
* [[CHC_345]]
+
** ORIGINAL_GENOME
+
***AUTOMATED-NAME-MATCH
+
* [[CHC_T00010196001]]
+
** ORIGINAL_GENOME
+
***AUTOMATED-NAME-MATCH
+
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-622]], starch biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-622 PWY-622]
 +
** '''8''' reactions found over '''10''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[orthology]]:
+
* Category: [[orthology]]
** [[pantograph]]:
+
** Source: [[orthology-galdieria.sulphuraria]]
*** [[galdieria.sulphuraria]]
+
*** Tool: [[pantograph]]
* [[annotation]]:
+
** [[pathwaytools]]:
+
*** [[original_genome]]
+
 
== External links  ==
 
== External links  ==
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=ATP-dependent DNA helicase RecQ putative}}
+
{{#set: ec number=EC-2.4.1.242}}
{{#set: common name=RecQ helicase}}
+
{{#set: gene associated=CHC_T00009277001_1}}
{{#set: common name=ATP-dependent DNA helicase RecQ, MusN}}
+
{{#set: in pathway=PWY-622}}
{{#set: common name=ATP-dependent DNA helicase, RecQ family}}
+
{{#set: common name=ATP-dependent DNA helicase recQ}}
+
{{#set: common name=replicative DNA helicase subunit}}
+
{{#set: common name=ATP-dependent DNA helicase RecQ}}
+
{{#set: common name=ATP-dependent DNA helicase RecQ family protein}}
+
{{#set: gene associated=CHC_T00010344001|CHC_T00007861001_1|CHC_T00009335001|CHC_T00008329001|CHC_T00010333001|CHC_T00010224001_1|CHC_T00009451001_1|CHC_T00004400001_1|CHC_T00008412001|CHC_T00004316001_1|CHC_T00009451001|CHC_T00010230001|CHC_T00008621001|CHC_T00010224001|CHC_T00010244001|CHC_T00010105001|CHC_345|CHC_T00010196001}}
+
{{#set: in pathway=}}
+
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-galdieria.sulphuraria}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
{{#set: reconstruction source=galdieria.sulphuraria}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction source=original_genome}}
 

Latest revision as of 17:37, 23 May 2018

Reaction RXN-14378

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-622, starch biosynthesis: PWY-622
    • 8 reactions found over 10 reactions in the full pathway

Reconstruction information

External links