Difference between revisions of "PEPSYNTH-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12568-HEXANAL/CO-A/NAD//HEXANOYL-COA/NADH/PROTON.43. RXN-12568-HEXANAL/CO-A/NAD//HEXANOYL-COA/N...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PEPSYNTH-RXN PEPSYNTH-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.o...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12568-HEXANAL/CO-A/NAD//HEXANOYL-COA/NADH/PROTON.43. RXN-12568-HEXANAL/CO-A/NAD//HEXANOYL-COA/NADH/PROTON.43.] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PEPSYNTH-RXN PEPSYNTH-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/2.7.9.2 EC-2.7.9.2]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[PROTON]][c] '''+''' 1.0 [[HEXANOYL-COA]][c] '''+''' 1.0 [[NADH]][c] '''=>''' 1.0 [[HEXANAL]][c] '''+''' 1.0 [[CO-A]][c] '''+''' 1.0 [[NAD]][c]
+
** 1 [[PYRUVATE]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[ATP]][c] '''=>''' 2 [[PROTON]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[PHOSPHO-ENOL-PYRUVATE]][c] '''+''' 1 [[Pi]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 H+[c] '''+''' 1.0 hexanoyl-CoA[c] '''+''' 1.0 NADH[c] '''=>''' 1.0 1-hexanal[c] '''+''' 1.0 coenzyme A[c] '''+''' 1.0 NAD+[c]
+
** 1 pyruvate[c] '''+''' 1 H2O[c] '''+''' 1 ATP[c] '''=>''' 2 H+[c] '''+''' 1 AMP[c] '''+''' 1 phosphoenolpyruvate[c] '''+''' 1 phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[CHC_T00008992001_1]]
 +
** Source: [[orthology-galdieria.sulphuraria]]
 +
* Gene: [[CHC_T00008789001_1]]
 +
** Source: [[orthology-galdieria.sulphuraria]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[P23-PWY]], reductive TCA cycle I: [http://metacyc.org/META/NEW-IMAGE?object=P23-PWY P23-PWY]
 +
** '''10''' reactions found over '''12''' reactions in the full pathway
 +
* [[PWY-5484]], glycolysis II (from fructose 6-phosphate): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5484 PWY-5484]
 +
** '''11''' reactions found over '''11''' reactions in the full pathway
 +
* [[GLUCONEO-PWY]], gluconeogenesis I: [http://metacyc.org/META/NEW-IMAGE?object=GLUCONEO-PWY GLUCONEO-PWY]
 +
** '''12''' reactions found over '''13''' reactions in the full pathway
 +
* [[GLYCOLYSIS]], glycolysis I (from glucose 6-phosphate): [http://metacyc.org/META/NEW-IMAGE?object=GLYCOLYSIS GLYCOLYSIS]
 +
** '''12''' reactions found over '''12''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[gap-filling]]:
+
* Category: [[orthology]]
−
** [[meneco]]:
+
** Source: [[orthology-galdieria.sulphuraria]]
−
*** [[added for gapfilling]]
+
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11364 11364]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00199 R00199]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P56070 P56070]
 +
** [http://www.uniprot.org/uniprot/O57830 O57830]
 +
** [http://www.uniprot.org/uniprot/Q9ZMV4 Q9ZMV4]
 +
** [http://www.uniprot.org/uniprot/Q9YEC5 Q9YEC5]
 +
** [http://www.uniprot.org/uniprot/Q57962 Q57962]
 +
** [http://www.uniprot.org/uniprot/O29548 O29548]
 +
** [http://www.uniprot.org/uniprot/Q9V2H7 Q9V2H7]
 +
** [http://www.uniprot.org/uniprot/O27190 O27190]
 +
** [http://www.uniprot.org/uniprot/O67899 O67899]
 +
** [http://www.uniprot.org/uniprot/Q9JVI5 Q9JVI5]
 +
** [http://www.uniprot.org/uniprot/P42850 P42850]
 +
** [http://www.uniprot.org/uniprot/P23538 P23538]
 +
** [http://www.uniprot.org/uniprot/P46893 P46893]
 +
** [http://www.uniprot.org/uniprot/Q55905 Q55905]
 +
** [http://www.uniprot.org/uniprot/O83026 O83026]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: in pathway=}}
+
{{#set: ec number=EC-2.7.9.2}}
−
{{#set: reconstruction category=gap-filling}}
+
{{#set: gene associated=CHC_T00008992001_1|CHC_T00008789001_1}}
−
{{#set: reconstruction tool=meneco}}
+
{{#set: in pathway=P23-PWY|PWY-5484|GLUCONEO-PWY|GLYCOLYSIS}}
−
{{#set: reconstruction source=added for gapfilling}}
+
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-galdieria.sulphuraria}}
 +
{{#set: reconstruction tool=pantograph}}

Revision as of 17:41, 23 May 2018

Reaction PEPSYNTH-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 pyruvate[c] + 1 H2O[c] + 1 ATP[c] => 2 H+[c] + 1 AMP[c] + 1 phosphoenolpyruvate[c] + 1 phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • P23-PWY, reductive TCA cycle I: P23-PWY
    • 10 reactions found over 12 reactions in the full pathway
  • PWY-5484, glycolysis II (from fructose 6-phosphate): PWY-5484
    • 11 reactions found over 11 reactions in the full pathway
  • GLUCONEO-PWY, gluconeogenesis I: GLUCONEO-PWY
    • 12 reactions found over 13 reactions in the full pathway
  • GLYCOLYSIS, glycolysis I (from glucose 6-phosphate): GLYCOLYSIS
    • 12 reactions found over 12 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=PEPSYNTH-RXN&oldid=17852"