Difference between revisions of "ATP-CITRATE-PRO-S--LYASE-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RETINOL-DEHYDROGENASE-RXN RETINOL-DEHYDROGENASE-RXN] == * direction: ** REVERSIBLE * common name: *...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ATP-CITRATE-PRO-S--LYASE-RXN ATP-CITRATE-PRO-S--LYASE-RXN] == * direction: ** LEFT-TO-RIGHT * commo...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RETINOL-DEHYDROGENASE-RXN RETINOL-DEHYDROGENASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ATP-CITRATE-PRO-S--LYASE-RXN ATP-CITRATE-PRO-S--LYASE-RXN] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** all-trans-retinol dehydrogenase (NAD)
+
** ATP citrate lyase
 +
** ATP-citrate lyase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.1.1.105 EC-1.1.1.105]
+
** [http://enzyme.expasy.org/EC/2.3.3.8 EC-2.3.3.8]
 
* Synonym(s):
 
* Synonym(s):
−
** all-trans retinol dehydrogenase
 
−
** retinal reductase
 
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[NAD]][c] '''+''' 1 [[CPD-13524]][c] '''<=>''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[RETINAL]][c]
+
** 1 [[CO-A]][c] '''+''' 1 [[CIT]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[OXALACETIC_ACID]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[Pi]][c] '''+''' 1 [[ACETYL-COA]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 NAD+[c] '''+''' 1 all-trans-retinol[c] '''<=>''' 1 NADH[c] '''+''' 1 H+[c] '''+''' 1 all-trans-retinal[c]
+
** 1 coenzyme A[c] '''+''' 1 citrate[c] '''+''' 1 ATP[c] '''=>''' 1 oxaloacetate[c] '''+''' 1 ADP[c] '''+''' 1 phosphate[c] '''+''' 1 acetyl-CoA[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[CHC_T00010066001_1]]
+
* Gene: [[CHC_T00009158001]]
−
** [[pantograph]]-[[a.taliana]]
+
** Source: [[annotation-original_genome]]
−
* [[CHC_T00009571001_1]]
+
*** Assignment: AUTOMATED-NAME-MATCH
−
** [[pantograph]]-[[a.taliana]]
+
* Gene: [[CHC_T00009045001_1]]
 +
** Source: [[orthology-galdieria.sulphuraria]]
 +
** Source: [[orthology-arabidopsis_thaliana]]
 +
* Gene: [[CHC_T00009158001_1]]
 +
** Source: [[orthology-galdieria.sulphuraria]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
** Source: [[orthology-arabidopsis_thaliana]]
 +
* Gene: [[CHC_T00009045001]]
 +
** Source: [[annotation-original_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-5172]], acetyl-CoA biosynthesis III (from citrate): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5172 PWY-5172]
 +
** '''1''' reactions found over '''1''' reactions in the full pathway
 +
* [[P23-PWY]], reductive TCA cycle I: [http://metacyc.org/META/NEW-IMAGE?object=P23-PWY P23-PWY]
 +
** '''10''' reactions found over '''12''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-arabidopsis_thaliana]]
−
*** [[a.taliana]]
+
*** Tool: [[pantograph]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-galdieria.sulphuraria]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-original_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21284 21284]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21160 21160]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R02124 R02124]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00352 R00352]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P50169 P50169]
+
** [http://www.uniprot.org/uniprot/P16638 P16638]
−
** [http://www.uniprot.org/uniprot/Q64437 Q64437]
+
{{#set: direction=LEFT-TO-RIGHT}}
−
** [http://www.uniprot.org/uniprot/P40394 P40394]
+
{{#set: common name=ATP citrate lyase}}
−
** [http://www.uniprot.org/uniprot/P50170 P50170]
+
{{#set: common name=ATP-citrate lyase}}
−
{{#set: direction=REVERSIBLE}}
+
{{#set: ec number=EC-2.3.3.8}}
−
{{#set: common name=all-trans-retinol dehydrogenase (NAD)}}
+
{{#set: gene associated=CHC_T00009158001|CHC_T00009045001_1|CHC_T00009158001_1|CHC_T00009045001}}
−
{{#set: ec number=EC-1.1.1.105}}
+
{{#set: in pathway=PWY-5172|P23-PWY}}
−
{{#set: common name=all-trans retinol dehydrogenase|retinal reductase}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: gene associated=CHC_T00010066001_1|CHC_T00009571001_1}}
+
{{#set: reconstruction source=annotation-original_genome|orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus|orthology-galdieria.sulphuraria}}
−
{{#set: in pathway=}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=a.taliana}}
+

Revision as of 17:57, 23 May 2018

Reaction ATP-CITRATE-PRO-S--LYASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ATP citrate lyase
    • ATP-citrate lyase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 coenzyme A[c] + 1 citrate[c] + 1 ATP[c] => 1 oxaloacetate[c] + 1 ADP[c] + 1 phosphate[c] + 1 acetyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5172, acetyl-CoA biosynthesis III (from citrate): PWY-5172
    • 1 reactions found over 1 reactions in the full pathway
  • P23-PWY, reductive TCA cycle I: P23-PWY
    • 10 reactions found over 12 reactions in the full pathway

Reconstruction information

External links





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