Difference between revisions of "RXN0-722"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17875 RXN-17875] == * direction: ** LEFT-TO-RIGHT * common name: ** methionyl aminopeptidase *...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-722 RXN0-722] == * direction: ** LEFT-TO-RIGHT * common name: ** ribonucleoside-diphosphate re...") |
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| Line 1: | Line 1: | ||
[[Category:Reaction]] | [[Category:Reaction]] | ||
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object= | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-722 RXN0-722] == |
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
* common name: | * common name: | ||
| − | ** | + | ** ribonucleoside-diphosphate reductase beta chain |
| + | ** ribonucleoside-diphosphate reductase alpha chain | ||
* ec number: | * ec number: | ||
| − | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/1.17.4.1 EC-1.17.4.1] |
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1 [[ | + | ** 1 [[UDP]][c] '''+''' 1 [[Reduced-NrdH-Proteins]][c] '''=>''' 1 [[Oxidized-NrdH-Proteins]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[DUDP]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1 | + | ** 1 UDP[c] '''+''' 1 a reduced NrdH glutaredoxin-like protein[c] '''=>''' 1 an oxidized NrdH glutaredoxin-like protein[c] '''+''' 1 H2O[c] '''+''' 1 dUDP[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | * [[ | + | * Gene: [[CHC_T00008926001]] |
| − | ** | + | ** Source: [[annotation-original_genome]] |
| − | ***AUTOMATED-NAME-MATCH | + | *** Assignment: AUTOMATED-NAME-MATCH |
| + | * Gene: [[CHC_T00008864001_1]] | ||
| + | ** Source: [[orthology-galdieria.sulphuraria]] | ||
| + | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
| + | * Gene: [[CHC_T00008926001_1]] | ||
| + | ** Source: [[orthology-galdieria.sulphuraria]] | ||
| + | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
| + | * Gene: [[CHC_T00008864001]] | ||
| + | ** Source: [[annotation-original_genome]] | ||
| + | *** Assignment: AUTOMATED-NAME-MATCH | ||
== Pathways == | == Pathways == | ||
| − | * [[ | + | * [[PWY0-166]], superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli): [http://metacyc.org/META/NEW-IMAGE?object=PWY0-166 PWY0-166] |
| − | ** ''' | + | ** '''12''' reactions found over '''17''' reactions in the full pathway |
== Reconstruction information == | == Reconstruction information == | ||
| − | * [[ | + | * Category: [[orthology]] |
| − | ** [[ | + | ** Source: [[orthology-ectocarpus_siliculosus]] |
| − | *** [[original_genome]] | + | *** Tool: [[pantograph]] |
| + | ** Source: [[orthology-galdieria.sulphuraria]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | * Category: [[annotation]] | ||
| + | ** Source: [[annotation-original_genome]] | ||
| + | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| − | {{#set: common name= | + | {{#set: common name=ribonucleoside-diphosphate reductase beta chain}} |
| − | {{#set: ec number=EC- | + | {{#set: common name=ribonucleoside-diphosphate reductase alpha chain}} |
| − | {{#set: gene associated= | + | {{#set: ec number=EC-1.17.4.1}} |
| − | {{#set: in pathway= | + | {{#set: gene associated=CHC_T00008926001|CHC_T00008864001_1|CHC_T00008926001_1|CHC_T00008864001}} |
| − | {{#set: reconstruction category=annotation}} | + | {{#set: in pathway=PWY0-166}} |
| − | {{#set: reconstruction | + | {{#set: reconstruction category=orthology|annotation}} |
| − | {{#set: reconstruction | + | {{#set: reconstruction source=annotation-original_genome|orthology-ectocarpus_siliculosus|orthology-galdieria.sulphuraria}} |
| + | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Revision as of 17:01, 23 May 2018
Contents
Reaction RXN0-722
- direction:
- LEFT-TO-RIGHT
- common name:
- ribonucleoside-diphosphate reductase beta chain
- ribonucleoside-diphosphate reductase alpha chain
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 UDP[c] + 1 Reduced-NrdH-Proteins[c] => 1 Oxidized-NrdH-Proteins[c] + 1 WATER[c] + 1 DUDP[c]
- With common name(s):
- 1 UDP[c] + 1 a reduced NrdH glutaredoxin-like protein[c] => 1 an oxidized NrdH glutaredoxin-like protein[c] + 1 H2O[c] + 1 dUDP[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: CHC_T00008926001
- Source: annotation-original_genome
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-original_genome
- Gene: CHC_T00008864001_1
- Source: orthology-galdieria.sulphuraria
- Source: orthology-ectocarpus_siliculosus
- Gene: CHC_T00008926001_1
- Source: orthology-galdieria.sulphuraria
- Source: orthology-ectocarpus_siliculosus
- Gene: CHC_T00008864001
- Source: annotation-original_genome
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-original_genome
Pathways
- PWY0-166, superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli): PWY0-166
- 12 reactions found over 17 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-galdieria.sulphuraria
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Category: annotation
- Source: annotation-original_genome
- Tool: pathwaytools
- Source: annotation-original_genome
