Difference between revisions of "PWY-5913"
From metabolic_network
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5913 PWY-5913] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1118 TAX-11...") |
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[[Category:Pathway]] | [[Category:Pathway]] | ||
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5913 PWY-5913] == | == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5913 PWY-5913] == | ||
| + | * common name: | ||
| + | ** partial TCA cycle (obligate autotrophs) | ||
* taxonomic range: | * taxonomic range: | ||
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1118 TAX-1118] | ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1118 TAX-1118] | ||
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1217 TAX-1217] | ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1217 TAX-1217] | ||
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1224 TAX-1224] | ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1224 TAX-1224] | ||
| − | |||
| − | |||
* Synonym(s): | * Synonym(s): | ||
** TCA cycle VI (obligate autotrophs) | ** TCA cycle VI (obligate autotrophs) | ||
| Line 18: | Line 18: | ||
*** [[CHC_T00008781001]] | *** [[CHC_T00008781001]] | ||
** 3 reconstruction source(s) associated: | ** 3 reconstruction source(s) associated: | ||
| + | *** [[orthology-galdieria.sulphuraria]] | ||
*** [[annotation-original_genome]] | *** [[annotation-original_genome]] | ||
*** [[orthology-ectocarpus_siliculosus]] | *** [[orthology-ectocarpus_siliculosus]] | ||
| − | |||
* [[ACONITATEHYDR-RXN]] | * [[ACONITATEHYDR-RXN]] | ||
** 3 associated gene(s): | ** 3 associated gene(s): | ||
| Line 27: | Line 27: | ||
*** [[CHC_T00008781001_1]] | *** [[CHC_T00008781001_1]] | ||
** 3 reconstruction source(s) associated: | ** 3 reconstruction source(s) associated: | ||
| + | *** [[orthology-galdieria.sulphuraria]] | ||
*** [[annotation-original_genome]] | *** [[annotation-original_genome]] | ||
*** [[orthology-ectocarpus_siliculosus]] | *** [[orthology-ectocarpus_siliculosus]] | ||
| − | |||
* [[ASPAMINOTRANS-RXN]] | * [[ASPAMINOTRANS-RXN]] | ||
** 8 associated gene(s): | ** 8 associated gene(s): | ||
| Line 41: | Line 41: | ||
*** [[CHC_T00010197001]] | *** [[CHC_T00010197001]] | ||
** 4 reconstruction source(s) associated: | ** 4 reconstruction source(s) associated: | ||
| + | *** [[orthology-galdieria.sulphuraria]] | ||
*** [[annotation-original_genome]] | *** [[annotation-original_genome]] | ||
*** [[orthology-arabidopsis_thaliana]] | *** [[orthology-arabidopsis_thaliana]] | ||
*** [[orthology-ectocarpus_siliculosus]] | *** [[orthology-ectocarpus_siliculosus]] | ||
| − | |||
* [[CITSYN-RXN]] | * [[CITSYN-RXN]] | ||
** 1 associated gene(s): | ** 1 associated gene(s): | ||
| Line 55: | Line 55: | ||
*** [[CHC_T00008951001]] | *** [[CHC_T00008951001]] | ||
** 4 reconstruction source(s) associated: | ** 4 reconstruction source(s) associated: | ||
| + | *** [[orthology-galdieria.sulphuraria]] | ||
*** [[annotation-original_genome]] | *** [[annotation-original_genome]] | ||
*** [[orthology-arabidopsis_thaliana]] | *** [[orthology-arabidopsis_thaliana]] | ||
*** [[orthology-ectocarpus_siliculosus]] | *** [[orthology-ectocarpus_siliculosus]] | ||
| − | |||
* [[GLUTDEHYD-RXN]] | * [[GLUTDEHYD-RXN]] | ||
** 2 associated gene(s): | ** 2 associated gene(s): | ||
| Line 64: | Line 64: | ||
*** [[CHC_T00010235001_1]] | *** [[CHC_T00010235001_1]] | ||
** 3 reconstruction source(s) associated: | ** 3 reconstruction source(s) associated: | ||
| + | *** [[orthology-galdieria.sulphuraria]] | ||
*** [[annotation-original_genome]] | *** [[annotation-original_genome]] | ||
*** [[orthology-ectocarpus_siliculosus]] | *** [[orthology-ectocarpus_siliculosus]] | ||
| − | |||
* [[ISOCITDEH-RXN]] | * [[ISOCITDEH-RXN]] | ||
** 1 associated gene(s): | ** 1 associated gene(s): | ||
*** [[CHC_T00009580001_1]] | *** [[CHC_T00009580001_1]] | ||
** 2 reconstruction source(s) associated: | ** 2 reconstruction source(s) associated: | ||
| + | *** [[orthology-galdieria.sulphuraria]] | ||
*** [[orthology-ectocarpus_siliculosus]] | *** [[orthology-ectocarpus_siliculosus]] | ||
| − | |||
* [[MALATE-DEH-RXN]] | * [[MALATE-DEH-RXN]] | ||
** 6 associated gene(s): | ** 6 associated gene(s): | ||
| − | |||
| − | |||
| − | |||
*** [[CHC_T00009292001_1]] | *** [[CHC_T00009292001_1]] | ||
*** [[CHC_T00008733001_1]] | *** [[CHC_T00008733001_1]] | ||
*** [[CHC_T00008600001_1]] | *** [[CHC_T00008600001_1]] | ||
| + | *** [[CHC_T00008733001]] | ||
| + | *** [[CHC_T00009350001_1]] | ||
| + | *** [[CHC_T00009173001_1]] | ||
** 4 reconstruction source(s) associated: | ** 4 reconstruction source(s) associated: | ||
| + | *** [[orthology-galdieria.sulphuraria]] | ||
*** [[annotation-original_genome]] | *** [[annotation-original_genome]] | ||
*** [[orthology-arabidopsis_thaliana]] | *** [[orthology-arabidopsis_thaliana]] | ||
*** [[orthology-ectocarpus_siliculosus]] | *** [[orthology-ectocarpus_siliculosus]] | ||
| − | |||
* [[PEPCARBOX-RXN]] | * [[PEPCARBOX-RXN]] | ||
** 1 associated gene(s): | ** 1 associated gene(s): | ||
*** [[CHC_T00008437001_1]] | *** [[CHC_T00008437001_1]] | ||
** 2 reconstruction source(s) associated: | ** 2 reconstruction source(s) associated: | ||
| − | |||
*** [[orthology-galdieria.sulphuraria]] | *** [[orthology-galdieria.sulphuraria]] | ||
| + | *** [[orthology-ectocarpus_siliculosus]] | ||
* [[SUCCCOASYN-RXN]] | * [[SUCCCOASYN-RXN]] | ||
** 2 associated gene(s): | ** 2 associated gene(s): | ||
| Line 97: | Line 97: | ||
*** [[CHC_T00008602001_1]] | *** [[CHC_T00008602001_1]] | ||
** 3 reconstruction source(s) associated: | ** 3 reconstruction source(s) associated: | ||
| + | *** [[orthology-galdieria.sulphuraria]] | ||
*** [[orthology-arabidopsis_thaliana]] | *** [[orthology-arabidopsis_thaliana]] | ||
*** [[orthology-ectocarpus_siliculosus]] | *** [[orthology-ectocarpus_siliculosus]] | ||
| − | |||
== Reaction(s) not found == | == Reaction(s) not found == | ||
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14970 RXN-14970] | * [http://metacyc.org/META/NEW-IMAGE?object=RXN-14970 RXN-14970] | ||
== External links == | == External links == | ||
| + | {{#set: common name=partial TCA cycle (obligate autotrophs)}} | ||
{{#set: taxonomic range=TAX-1118}} | {{#set: taxonomic range=TAX-1118}} | ||
{{#set: taxonomic range=TAX-1217}} | {{#set: taxonomic range=TAX-1217}} | ||
{{#set: taxonomic range=TAX-1224}} | {{#set: taxonomic range=TAX-1224}} | ||
| − | |||
{{#set: common name=TCA cycle VI (obligate autotrophs)}} | {{#set: common name=TCA cycle VI (obligate autotrophs)}} | ||
{{#set: reaction found=10}} | {{#set: reaction found=10}} | ||
{{#set: total reaction=11}} | {{#set: total reaction=11}} | ||
{{#set: completion rate=91.0}} | {{#set: completion rate=91.0}} | ||
Latest revision as of 14:59, 9 January 2019
Pathway PWY-5913
- common name:
- partial TCA cycle (obligate autotrophs)
- taxonomic range:
- Synonym(s):
- TCA cycle VI (obligate autotrophs)
Reaction(s) found
10 reactions found over 11 reactions in the full pathway
- ACONITATEDEHYDR-RXN
- 3 associated gene(s):
- 3 reconstruction source(s) associated:
- ACONITATEHYDR-RXN
- 3 associated gene(s):
- 3 reconstruction source(s) associated:
- ASPAMINOTRANS-RXN
- 8 associated gene(s):
- 4 reconstruction source(s) associated:
- CITSYN-RXN
- 1 associated gene(s):
- 1 reconstruction source(s) associated:
- FUMHYDR-RXN
- 2 associated gene(s):
- 4 reconstruction source(s) associated:
- GLUTDEHYD-RXN
- 2 associated gene(s):
- 3 reconstruction source(s) associated:
- ISOCITDEH-RXN
- 1 associated gene(s):
- 2 reconstruction source(s) associated:
- MALATE-DEH-RXN
- 6 associated gene(s):
- 4 reconstruction source(s) associated:
- PEPCARBOX-RXN
- 1 associated gene(s):
- 2 reconstruction source(s) associated:
- SUCCCOASYN-RXN
- 2 associated gene(s):
- 3 reconstruction source(s) associated:
